Resource
| Id | summary/liu2026Multiomics/pseudobulk_accessibility/Brain/c8/mean_counts_contribs |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | mean_counts_contribs for Brain for cell cluster c8 |
| Description |
Downloaded from: https://zenodo.org/records/15066651. Description of the data and download instructions can be found https://github.com/GreenleafLab/HDMA/blob/main/DATA.md |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| liu2026Multiomics_Brain_c8_mean_counts_contribs | float |
liu2026Multiomics_Brain_c8_mean_counts_contribs |
base-resolution contribution scores for the counts head of ChromBPNet as computed by DeepLIFT
|
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[-0.0624, 0.253] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 199136529 | 6.21% | 197904810 |
| chr1 | 18800072 | 7.55% | 18684962 |
| chr2 | 16288173 | 6.73% | 16186140 |
| chr3 | 12822842 | 6.47% | 12741250 |
| chr4 | 9224849 | 4.85% | 9163177 |
| chr5 | 10432249 | 5.75% | 10366416 |
| chr6 | 11684200 | 6.84% | 11611557 |
| chr7 | 10227868 | 6.42% | 10164158 |
| chr8 | 8752394 | 6.03% | 8697625 |
| chr9 | 8491792 | 6.14% | 8440163 |
| chr10 | 9786815 | 7.31% | 9725926 |
| chr11 | 10640899 | 7.88% | 10576673 |
| chr12 | 9361836 | 7.02% | 9304015 |
| chr13 | 5189529 | 4.54% | 5156205 |
| chr14 | 6380084 | 5.96% | 6341299 |
| chr15 | 6553177 | 6.43% | 6512659 |
| chr16 | 6835132 | 7.57% | 6795971 |
| chr17 | 9084641 | 10.91% | 9032141 |
| chr18 | 4357243 | 5.42% | 4328092 |
| chr19 | 7271839 | 12.41% | 7232628 |
| chr20 | 5484074 | 8.51% | 5450656 |
| chr21 | 2413955 | 5.17% | 2398694 |
| chr22 | 4199682 | 8.26% | 4175664 |
| chrX | 4700983 | 3.01% | 4671431 |
| chrY | 152201 | 0.27% | 147308 |
| 431 contigs with no values (121016273 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 197904810 | 1 | 2532 | 1.01 | 1 |
Files
| Filename | Size | md5 |
|---|---|---|
| Brain_c8__mean_counts_contribs.bw | 1.2 GB | ab16a83d08528cc10e619ca71d8f9a58 |
| genomic_resource.yaml | 1.31 KB | 4dd797dc69427fa184f4661c077ed2cb |
| statistics/ |
