Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Brain/c8/mean_pred_correctedcontent_copy
Type position_score
Version 0
Summary mean_pred_corrected for Brain for cell cluster c8
Description
Labels
  • assay: SHARE-seq
  • cluster: Brain_c8
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Brain
  • processing_level: phred_normalized
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Brain_c8_mean_pred_corrected float

liu2026Multiomics_Brain_c8_mean_pred_corrected

bias-corrected accessibility predicted by ChromBPNet
HISTOGRAM FOR liu2026Multiomics_Brain_c8_mean_pred_corrected [0.00124, 44.4]
n
105,475,999
mean
0.242
sd
0.615

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1054759993.29% 105474337
chr1 10001185 4.02% 10001182
chr2 8572322 3.54% 8572317
chr3 6757583 3.41% 6757581
chr4 4828350 2.54% 4828348
chr5 5476664 3.02% 5476660
chr6 6185838 3.62% 6185837
chr7 5373813 3.37% 5373811
chr8 4591414 3.16% 4591411
chr9 4514715 3.26% 4514711
chr10 5149774 3.85% 5149771
chr11 5675260 4.20% 5675255
chr12 4960042 3.72% 4960040
chr13 2710597 2.37% 2710596
chr14 3383096 3.16% 3383093
chr15 3465803 3.40% 3465799
chr16 3649784 4.04% 3649784
chr17 4910041 5.90% 4910038
chr18 2283339 2.84% 2283338
chr19 3999926 6.82% 3999922
chr20 2893488 4.49% 2893486
chr21 1279877 2.74% 1279875
chr22 2238369 4.40% 2238367
chrX 2491151 1.60% 2491149
chrY 83568 0.15% 81966
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 105474337 1 1146 1 1
global segment-length histogram

Files

Filename Size md5
Brain_c8__mean_pred_corrected.bw 799.31 MB 08c35b032494fbf6138462276a9c12d5
genomic_resource.yaml 1.27 KB 1b62a490de2ca13efc6ff5c2c79d5415
statistics/