Resource
| Id | summary/liu2026Multiomics/pseudobulk_accessibility/Eye/c0/mean_counts_contribs |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | mean_counts_contribs for Eye for cell cluster c0 |
| Description |
Downloaded from: https://zenodo.org/records/15066651. Description of the data and download instructions can be found https://github.com/GreenleafLab/HDMA/blob/main/DATA.md |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| liu2026Multiomics_Eye_c0_mean_counts_contribs | float |
liu2026Multiomics_Eye_c0_mean_counts_contribs |
base-resolution contribution scores for the counts head of ChromBPNet as computed by DeepLIFT
|
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[-0.0848, 0.196] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 180728165 | 5.63% | 179747654 |
| chr1 | 16868063 | 6.78% | 16776341 |
| chr2 | 14146699 | 5.84% | 14070681 |
| chr3 | 11187962 | 5.64% | 11125547 |
| chr4 | 8689636 | 4.57% | 8640032 |
| chr5 | 9676291 | 5.33% | 9623608 |
| chr6 | 10128835 | 5.93% | 10073724 |
| chr7 | 9197780 | 5.77% | 9147578 |
| chr8 | 7748824 | 5.34% | 7706420 |
| chr9 | 7944564 | 5.74% | 7901192 |
| chr10 | 8974996 | 6.71% | 8926006 |
| chr11 | 10348443 | 7.66% | 10294262 |
| chr12 | 8553718 | 6.42% | 8507410 |
| chr13 | 4784659 | 4.18% | 4758340 |
| chr14 | 5935288 | 5.54% | 5903321 |
| chr15 | 5799099 | 5.69% | 5767809 |
| chr16 | 6230948 | 6.90% | 6197274 |
| chr17 | 8219483 | 9.87% | 8175812 |
| chr18 | 4480803 | 5.57% | 4454733 |
| chr19 | 6714695 | 11.46% | 6680408 |
| chr20 | 4982731 | 7.73% | 4956323 |
| chr21 | 1924116 | 4.12% | 1913221 |
| chr22 | 3576451 | 7.04% | 3557905 |
| chrX | 4561973 | 2.92% | 4537870 |
| chrY | 52108 | 0.09% | 51837 |
| 431 contigs with no values (121016273 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 179747654 | 1 | 950 | 1.01 | 1 |
Files
| Filename | Size | md5 |
|---|---|---|
| Eye_c0__mean_counts_contribs.bw | 1.09 GB | 0ddcab26cbd07cca365a77e7924b282e |
| genomic_resource.yaml | 1.3 KB | 2f1997cb898643bfd277399a80805471 |
| statistics/ |
