Resource
| Id | summary/liu2026Multiomics/pseudobulk_accessibility/Eye/c0/mean_pred_corrected |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | mean_pred_corrected for Eye for cell cluster c0 |
| Description |
Downloaded from: https://zenodo.org/records/15066651. Description of the data and download instructions can be found https://github.com/GreenleafLab/HDMA/blob/main/DATA.md |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| liu2026Multiomics_Eye_c0_mean_pred_corrected | float |
liu2026Multiomics_Eye_c0_mean_pred_corrected |
bias-corrected accessibility predicted by ChromBPNet
|
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[0.000217, 33.6] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 100112315 | 3.12% | 100112253 |
| chr1 | 9359149 | 3.76% | 9359144 |
| chr2 | 7842962 | 3.24% | 7842959 |
| chr3 | 6117698 | 3.09% | 6117696 |
| chr4 | 4798188 | 2.52% | 4798186 |
| chr5 | 5329146 | 2.94% | 5329143 |
| chr6 | 5602473 | 3.28% | 5602469 |
| chr7 | 5076497 | 3.19% | 5076494 |
| chr8 | 4263922 | 2.94% | 4263919 |
| chr9 | 4417569 | 3.19% | 4417566 |
| chr10 | 4950081 | 3.70% | 4950079 |
| chr11 | 5760779 | 4.26% | 5760771 |
| chr12 | 4731705 | 3.55% | 4731701 |
| chr13 | 2640260 | 2.31% | 2640260 |
| chr14 | 3294774 | 3.08% | 3294772 |
| chr15 | 3216342 | 3.15% | 3216340 |
| chr16 | 3456317 | 3.83% | 3456315 |
| chr17 | 4615885 | 5.54% | 4615884 |
| chr18 | 2467072 | 3.07% | 2467069 |
| chr19 | 3809104 | 6.50% | 3809102 |
| chr20 | 2744694 | 4.26% | 2744691 |
| chr21 | 1061993 | 2.27% | 1061993 |
| chr22 | 1992692 | 3.92% | 1992690 |
| chrX | 2533479 | 1.62% | 2533476 |
| chrY | 29534 | 0.05% | 29534 |
| 431 contigs with no values (121016273 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 100112253 | 1 | 2 | 1 | 1 |
Files
| Filename | Size | md5 |
|---|---|---|
| Eye_c0__mean_pred_corrected.bw | 757.62 MB | 4fe1e3f5da3ea407c8aa62d967f4ca60 |
| genomic_resource.yaml | 1.26 KB | 2445ec5c0495f4d043e39d86de393622 |
| statistics/ |
