Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Eye/c0/obs_pval_signalcontent_copy
Type position_score
Version 0
Summary obs_pval_signal for Eye for cell cluster c0
Description
Labels
  • assay: SHARE-seq
  • cluster: Eye_c0
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Eye
  • processing_level: obs_pval
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Eye_c0_obs_pval_signal float

liu2026Multiomics_Eye_c0_obs_pval_signal

Macs2 p-value signal track for observed accessibility
HISTOGRAM FOR liu2026Multiomics_Eye_c0_obs_pval_signal [0, 2.5e+03]
n
3,087,293,494
mean
0.547
sd
6.66

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 308729349496.20% 108143125
chr1 248946444 >99.99% 9665746
chr2 242183501 >99.99% 8841030
chr3 198232708 99.97% 7070208
chr4 190204535 99.99% 6209244
chr5 181477159 99.97% 5968551
chr6 170743810 99.96% 6141177
chr7 159335914 99.99% 5783242
chr8 145078171 99.96% 4814114
chr9 138309425 99.94% 4741512
chr10 133787439 99.99% 5158650
chr11 135076543 99.99% 6107569
chr12 133265010 99.99% 5258364
chr13 114354206 99.99% 3211235
chr14 106883740 99.85% 3572735
chr15 101981166 99.99% 3064763
chr16 90226303 99.88% 3406592
chr17 83247271 99.99% 4311957
chr18 80263247 99.86% 2776203
chr19 58607600 99.98% 3491833
chr20 64332686 99.83% 2640451
chr21 46699977 99.98% 1195912
chr22 50808435 99.98% 1956568
chrX 156030846 99.99% 2740283
chrY 57217358 99.98% 15186
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 108143125 1 30002171 28.55 8
global segment-length histogram

Files

Filename Size md5
Eye_c0__obs_pval_signal.bw 624.41 MB 61e32f1f4998f7ee659d32443a7e36cc
genomic_resource.yaml 1.22 KB 6c1364169fc4cd02d4b704d5657fd53b
statistics/