Resource
| Id | summary/liu2026Multiomics/pseudobulk_accessibility/Eye/c1/mean_counts_contribs |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | mean_counts_contribs for Eye for cell cluster c1 |
| Description |
Downloaded from: https://zenodo.org/records/15066651. Description of the data and download instructions can be found https://github.com/GreenleafLab/HDMA/blob/main/DATA.md |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| liu2026Multiomics_Eye_c1_mean_counts_contribs | float |
liu2026Multiomics_Eye_c1_mean_counts_contribs |
base-resolution contribution scores for the counts head of ChromBPNet as computed by DeepLIFT
|
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[-0.0786, 0.236] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 237248343 | 7.39% | 235823820 |
| chr1 | 21911145 | 8.80% | 21782300 |
| chr2 | 19295180 | 7.97% | 19178313 |
| chr3 | 15250707 | 7.69% | 15156936 |
| chr4 | 11737553 | 6.17% | 11661794 |
| chr5 | 13213889 | 7.28% | 13132467 |
| chr6 | 14080473 | 8.24% | 13994954 |
| chr7 | 12379478 | 7.77% | 12303931 |
| chr8 | 10815258 | 7.45% | 10749234 |
| chr9 | 10594348 | 7.66% | 10529913 |
| chr10 | 11852555 | 8.86% | 11781709 |
| chr11 | 13026745 | 9.64% | 12951592 |
| chr12 | 11361314 | 8.52% | 11293502 |
| chr13 | 6420319 | 5.61% | 6380148 |
| chr14 | 7532474 | 7.04% | 7487375 |
| chr15 | 7636168 | 7.49% | 7590970 |
| chr16 | 7778277 | 8.61% | 7734026 |
| chr17 | 10247154 | 12.31% | 10188867 |
| chr18 | 5438603 | 6.77% | 5403584 |
| chr19 | 7677969 | 13.10% | 7636787 |
| chr20 | 6451765 | 10.01% | 6414656 |
| chr21 | 2795199 | 5.98% | 2777454 |
| chr22 | 4653030 | 9.16% | 4627534 |
| chrX | 5063824 | 3.25% | 5033625 |
| chrY | 34916 | 0.06% | 32149 |
| 431 contigs with no values (121016273 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 235823820 | 1 | 2589 | 1.01 | 1 |
Files
| Filename | Size | md5 |
|---|---|---|
| Eye_c1__mean_counts_contribs.bw | 1.42 GB | 38f55bfb90b9a0ed8cc6e7f260113f0c |
| genomic_resource.yaml | 1.3 KB | 866e893c100d1c74adb073f413434367 |
| statistics/ |
