Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Eye/c1/obs_pval_signalcontent_copy
Type position_score
Version 0
Summary obs_pval_signal for Eye for cell cluster c1
Description
Labels
  • assay: SHARE-seq
  • cluster: Eye_c1
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Eye
  • processing_level: obs_pval
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Eye_c1_obs_pval_signal float

liu2026Multiomics_Eye_c1_obs_pval_signal
Macs2 p-value signal track for observed accessibility
 HISTOGRAM FOR liu2026Multiomics_Eye_c1_obs_pval_signal [0, 8.71e+03]
n
3,087,282,515
mean
0.736
sd
11.2

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 308728251596.20% 196995191
chr1 248946463 >99.99% 17225876
chr2 242183501 >99.99% 16167418
chr3 198220542 99.96% 13195584
chr4 190204556 99.99% 11353866
chr5 181477763 99.97% 11455929
chr6 170742234 99.96% 11486169
chr7 159335958 99.99% 10731147
chr8 145078377 99.96% 9177173
chr9 138309994 99.94% 8469486
chr10 133787445 99.99% 9447719
chr11 135076577 99.99% 10429628
chr12 133265011 99.99% 9467196
chr13 114354200 99.99% 5723431
chr14 106883696 99.85% 6214204
chr15 101981161 99.99% 5709270
chr16 90226287 99.88% 6184685
chr17 83247392 99.99% 7473726
chr18 80263248 99.86% 4806990
chr19 58607601 99.98% 5787615
chr20 64333867 99.83% 4856826
chr21 46699971 99.98% 2358916
chr22 50808459 99.98% 3551316
chrX 156030846 99.99% 5651078
chrY 57217366 99.98% 69943
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 196995191 1 30001620 15.67 6
global segment-length histogram

Files

Filename Size md5
Eye_c1__obs_pval_signal.bw 1.09 GB a48d79aba92a0aded6a9c9902a1420ef
genomic_resource.yaml 1.22 KB c8f5f4c03c3e5494664ee130733b7e18
statistics/