Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Eye/c10/obs_pval_signalcontent_copy
Type position_score
Version 0
Summary obs_pval_signal for Eye for cell cluster c10
Description
Labels
  • assay: SHARE-seq
  • cluster: Eye_c10
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Eye
  • processing_level: obs_pval
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Eye_c10_obs_pval_signal float

liu2026Multiomics_Eye_c10_obs_pval_signal

Macs2 p-value signal track for observed accessibility
HISTOGRAM FOR liu2026Multiomics_Eye_c10_obs_pval_signal [0, 1.34e+03]
n
3,087,226,120
mean
0.319
sd
1.86

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 308722612096.20% 47427495
chr1 248946456 >99.99% 4250346
chr2 242183496 >99.99% 3719447
chr3 198220280 99.96% 3078112
chr4 190204487 99.99% 2603267
chr5 181477373 99.97% 2615201
chr6 170741910 99.96% 2743384
chr7 159335901 99.99% 2512475
chr8 145075983 99.96% 2126084
chr9 138258526 99.90% 2072491
chr10 133787439 99.99% 2146351
chr11 135076567 99.99% 2629560
chr12 133265011 99.99% 2304882
chr13 114353612 99.99% 1291866
chr14 106883696 99.85% 1563128
chr15 101981143 99.99% 1385093
chr16 90225541 99.88% 1641537
chr17 83247366 99.99% 2067021
chr18 80263246 99.86% 1110801
chr19 58607593 99.98% 1817190
chr20 64333867 99.83% 1172844
chr21 46699971 99.98% 573303
chr22 50808459 99.98% 934874
chrX 156030845 99.99% 1065030
chrY 57217352 99.98% 3208
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 47427495 1 30013539 65.09 14
global segment-length histogram

Files

Filename Size md5
Eye_c10__obs_pval_signal.bw 274.86 MB 392135ef1f8efa4bd7bdf0466beabc78
genomic_resource.yaml 1.23 KB 4ae8a46cbce665125b403c235ce3b17a
statistics/