Resource
| Id | summary/liu2026Multiomics/pseudobulk_accessibility/Eye/c11/mean_counts_contribs |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | mean_counts_contribs for Eye for cell cluster c11 |
| Description |
Downloaded from: https://zenodo.org/records/15066651. Description of the data and download instructions can be found https://github.com/GreenleafLab/HDMA/blob/main/DATA.md |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| liu2026Multiomics_Eye_c11_mean_counts_contribs | float |
liu2026Multiomics_Eye_c11_mean_counts_contribs |
base-resolution contribution scores for the counts head of ChromBPNet as computed by DeepLIFT
|
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[-0.0454, 0.116] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 113086773 | 3.52% | 112313797 |
| chr1 | 10867728 | 4.37% | 10794320 |
| chr2 | 8627103 | 3.56% | 8568160 |
| chr3 | 6671977 | 3.36% | 6624866 |
| chr4 | 4881733 | 2.57% | 4846293 |
| chr5 | 6079085 | 3.35% | 6036689 |
| chr6 | 6382203 | 3.74% | 6338232 |
| chr7 | 5976024 | 3.75% | 5934547 |
| chr8 | 5007899 | 3.45% | 4973240 |
| chr9 | 4823606 | 3.49% | 4789790 |
| chr10 | 5507402 | 4.12% | 5469160 |
| chr11 | 6375916 | 4.72% | 6332976 |
| chr12 | 5469572 | 4.10% | 5432607 |
| chr13 | 2831180 | 2.48% | 2811104 |
| chr14 | 3575942 | 3.34% | 3551767 |
| chr15 | 3804521 | 3.73% | 3778195 |
| chr16 | 4041526 | 4.47% | 4014779 |
| chr17 | 5481563 | 6.58% | 5445377 |
| chr18 | 2707361 | 3.37% | 2688538 |
| chr19 | 4923878 | 8.40% | 4892869 |
| chr20 | 3134813 | 4.86% | 3113998 |
| chr21 | 1132389 | 2.42% | 1124707 |
| chr22 | 2257349 | 4.44% | 2242554 |
| chrX | 2500721 | 1.60% | 2483919 |
| chrY | 25282 | 0.04% | 25110 |
| 431 contigs with no values (121016273 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 112313797 | 1 | 939 | 1.01 | 1 |
Files
| Filename | Size | md5 |
|---|---|---|
| Eye_c11__mean_counts_contribs.bw | 694.9 MB | 52a287b89c3e1329f40fda46d0da0feb |
| genomic_resource.yaml | 1.3 KB | 213a01049b60b17652089d2241d28dcb |
| statistics/ |
