Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Eye/c11/obs_pval_signalcontent_copy
Type position_score
Version 0
Summary obs_pval_signal for Eye for cell cluster c11
Description
Labels
  • assay: SHARE-seq
  • cluster: Eye_c11
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Eye
  • processing_level: obs_pval
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Eye_c11_obs_pval_signal float

liu2026Multiomics_Eye_c11_obs_pval_signal

Macs2 p-value signal track for observed accessibility
HISTOGRAM FOR liu2026Multiomics_Eye_c11_obs_pval_signal [0, 572]
n
3,087,184,282
mean
0.36
sd
1.55

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 308718428296.20% 30814939
chr1 248946456 >99.99% 2903457
chr2 242183501 >99.99% 2423906
chr3 198182628 99.94% 1845651
chr4 190203749 99.99% 1378357
chr5 181475196 99.97% 1620662
chr6 170737913 99.96% 1651075
chr7 159334311 99.99% 1693585
chr8 145076019 99.96% 1352534
chr9 138272949 99.91% 1336687
chr10 133787445 99.99% 1476195
chr11 135076398 99.99% 1800290
chr12 133264461 99.99% 1507355
chr13 114353694 99.99% 757402
chr14 106883560 99.85% 991492
chr15 101980970 99.99% 950923
chr16 90216901 99.87% 1106048
chr17 83247392 99.99% 1503082
chr18 80263246 99.86% 736172
chr19 58607600 99.98% 1369890
chr20 64333450 99.83% 861550
chr21 46699965 99.98% 336806
chr22 50808344 99.98% 657515
chrX 156030768 99.99% 551785
chrY 57217366 99.98% 2520
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 30814939 1 30012870 100.18 14
global segment-length histogram

Files

Filename Size md5
Eye_c11__obs_pval_signal.bw 179.24 MB 88d944a17eb775bd9651424767eafd44
genomic_resource.yaml 1.23 KB 4365e0c197c1d2ef37cad04b08c49e94
statistics/