Resource
| Id | summary/liu2026Multiomics/pseudobulk_accessibility/Eye/c12/mean_counts_contribs |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | mean_counts_contribs for Eye for cell cluster c12 |
| Description |
Downloaded from: https://zenodo.org/records/15066651. Description of the data and download instructions can be found https://github.com/GreenleafLab/HDMA/blob/main/DATA.md |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| liu2026Multiomics_Eye_c12_mean_counts_contribs | float |
liu2026Multiomics_Eye_c12_mean_counts_contribs |
base-resolution contribution scores for the counts head of ChromBPNet as computed by DeepLIFT
|
![]() |
[-0.0302, 0.0907] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 94389814 | 2.94% | 93525097 |
| chr1 | 9363041 | 3.76% | 9277350 |
| chr2 | 7142543 | 2.95% | 7076280 |
| chr3 | 5910569 | 2.98% | 5854517 |
| chr4 | 4552052 | 2.39% | 4507798 |
| chr5 | 4885560 | 2.69% | 4840338 |
| chr6 | 5656375 | 3.31% | 5603896 |
| chr7 | 4773919 | 3.00% | 4729124 |
| chr8 | 3961523 | 2.73% | 3924805 |
| chr9 | 4202507 | 3.04% | 4164231 |
| chr10 | 4302289 | 3.22% | 4262626 |
| chr11 | 5142665 | 3.81% | 5096432 |
| chr12 | 4760380 | 3.57% | 4717051 |
| chr13 | 2197248 | 1.92% | 2176622 |
| chr14 | 3044809 | 2.84% | 3016660 |
| chr15 | 3065133 | 3.01% | 3036779 |
| chr16 | 3200268 | 3.54% | 3172451 |
| chr17 | 4583985 | 5.51% | 4544076 |
| chr18 | 1864923 | 2.32% | 1845962 |
| chr19 | 4068754 | 6.94% | 4035709 |
| chr20 | 2476790 | 3.84% | 2454692 |
| chr21 | 1046929 | 2.24% | 1037337 |
| chr22 | 1799834 | 3.54% | 1784129 |
| chrX | 2378918 | 1.52% | 2357490 |
| chrY | 8800 | 0.02% | 8742 |
| 431 contigs with no values (121016273 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 93525097 | 1 | 957 | 1.01 | 1 |
Files
| Filename | Size | md5 |
|---|---|---|
| Eye_c12__mean_counts_contribs.bw | 579.75 MB | f27edc53a32617710f2a20489d16ff04 |
| genomic_resource.yaml | 1.3 KB | affb28a47d60ffd8291086f89acec307 |
| statistics/ |
