Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Eye/c12/obs_pval_signalcontent_copy
Type position_score
Version 0
Summary obs_pval_signal for Eye for cell cluster c12
Description
Labels
  • assay: SHARE-seq
  • cluster: Eye_c12
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Eye
  • processing_level: obs_pval
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Eye_c12_obs_pval_signal float

liu2026Multiomics_Eye_c12_obs_pval_signal

Macs2 p-value signal track for observed accessibility
HISTOGRAM FOR liu2026Multiomics_Eye_c12_obs_pval_signal [0, 981]
n
3,087,268,919
mean
0.508
sd
1.26

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 308726891996.20% 27359691
chr1 248946456 >99.99% 2503949
chr2 242183501 >99.99% 2169157
chr3 198220320 99.96% 1791549
chr4 190204412 99.99% 1529136
chr5 181477763 99.97% 1530083
chr6 170742234 99.96% 1614219
chr7 159335893 99.99% 1430673
chr8 145078273 99.96% 1209330
chr9 138309994 99.94% 1188332
chr10 133787427 99.99% 1275378
chr11 135076572 99.99% 1435189
chr12 133264545 99.99% 1368064
chr13 114354022 99.99% 724559
chr14 106883566 99.85% 868942
chr15 101981143 99.99% 771024
chr16 90225660 99.88% 910028
chr17 83238003 99.98% 1141502
chr18 80263246 99.86% 593786
chr19 58607509 99.98% 1036536
chr20 64331985 99.83% 673581
chr21 46699965 99.98% 321375
chr22 50808344 99.98% 482277
chrX 156030792 99.99% 783783
chrY 57217294 99.98% 7239
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 27359691 1 30027606 112.84 41
global segment-length histogram

Files

Filename Size md5
Eye_c12__obs_pval_signal.bw 153.6 MB b427d656c56b438013d26985c4747881
genomic_resource.yaml 1.23 KB 442155a226e9590ff32fe57073429855
statistics/