Resource
| Id | summary/liu2026Multiomics/pseudobulk_accessibility/Eye/c13/mean_counts_contribs |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | mean_counts_contribs for Eye for cell cluster c13 |
| Description |
Downloaded from: https://zenodo.org/records/15066651. Description of the data and download instructions can be found https://github.com/GreenleafLab/HDMA/blob/main/DATA.md |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| liu2026Multiomics_Eye_c13_mean_counts_contribs | float |
liu2026Multiomics_Eye_c13_mean_counts_contribs |
base-resolution contribution scores for the counts head of ChromBPNet as computed by DeepLIFT
|
![]() |
[-0.0768, 0.112] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 122517304 | 3.82% | 121558392 |
| chr1 | 11859418 | 4.76% | 11767945 |
| chr2 | 9575702 | 3.95% | 9500416 |
| chr3 | 7754643 | 3.91% | 7692927 |
| chr4 | 5069209 | 2.66% | 5024757 |
| chr5 | 6468426 | 3.56% | 6416197 |
| chr6 | 6700551 | 3.92% | 6647224 |
| chr7 | 6138963 | 3.85% | 6090381 |
| chr8 | 5120827 | 3.53% | 5079676 |
| chr9 | 5560170 | 4.02% | 5517007 |
| chr10 | 6151152 | 4.60% | 6103907 |
| chr11 | 6763274 | 5.01% | 6712429 |
| chr12 | 5899199 | 4.43% | 5852470 |
| chr13 | 2948759 | 2.58% | 2924559 |
| chr14 | 3869098 | 3.61% | 3839306 |
| chr15 | 4106395 | 4.03% | 4074549 |
| chr16 | 4629001 | 5.12% | 4595054 |
| chr17 | 5942203 | 7.14% | 5898559 |
| chr18 | 2477229 | 3.08% | 2455520 |
| chr19 | 4814316 | 8.21% | 4780242 |
| chr20 | 3468083 | 5.38% | 3442239 |
| chr21 | 1357243 | 2.91% | 1346584 |
| chr22 | 2736608 | 5.39% | 2716772 |
| chrX | 3063935 | 1.96% | 3039202 |
| chrY | 42900 | 0.07% | 40470 |
| 431 contigs with no values (121016273 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 121558392 | 1 | 2114 | 1.01 | 1 |
Files
| Filename | Size | md5 |
|---|---|---|
| Eye_c13__mean_counts_contribs.bw | 753.99 MB | df0c3d9bbb219f539875d64d5871f492 |
| genomic_resource.yaml | 1.3 KB | 1e284b5745016aae882b3a6463ab10ef |
| statistics/ |
