Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Eye/c13/obs_pval_signalcontent_copy
Type position_score
Version 0
Summary obs_pval_signal for Eye for cell cluster c13
Description
Labels
  • assay: SHARE-seq
  • cluster: Eye_c13
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Eye
  • processing_level: obs_pval
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Eye_c13_obs_pval_signal float

liu2026Multiomics_Eye_c13_obs_pval_signal

Macs2 p-value signal track for observed accessibility
HISTOGRAM FOR liu2026Multiomics_Eye_c13_obs_pval_signal [0, 669]
n
3,087,196,281
mean
0.544
sd
1.44

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 308719628196.20% 35254231
chr1 248946456 >99.99% 3236586
chr2 242183501 >99.99% 2792403
chr3 198181950 99.94% 2337133
chr4 190203753 99.99% 1798484
chr5 181475727 99.97% 1946098
chr6 170740512 99.96% 1947509
chr7 159335903 99.99% 1840579
chr8 145075964 99.96% 1512363
chr9 138277094 99.92% 1581482
chr10 133787434 99.99% 1708076
chr11 135076543 99.99% 1934777
chr12 133264646 99.99% 1686661
chr13 114353769 99.99% 959565
chr14 106883696 99.85% 1146496
chr15 101981143 99.99% 1061838
chr16 90220248 99.87% 1230374
chr17 83247271 99.99% 1561968
chr18 80263234 99.86% 755231
chr19 58607600 99.98% 1308851
chr20 64333454 99.83% 908320
chr21 46699960 99.98% 407952
chr22 50808226 99.98% 732070
chrX 156030846 99.99% 839787
chrY 57217351 99.98% 19628
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 35254231 1 30013043 87.57 26
global segment-length histogram

Files

Filename Size md5
Eye_c13__obs_pval_signal.bw 203.96 MB 61481f77e76b7744de42cc9df8e6d09c
genomic_resource.yaml 1.23 KB 0d69fac6eb7b25db30da246783af4c5c
statistics/