Resource
| Id | summary/liu2026Multiomics/pseudobulk_accessibility/Eye/c14/mean_counts_contribs |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | mean_counts_contribs for Eye for cell cluster c14 |
| Description |
Downloaded from: https://zenodo.org/records/15066651. Description of the data and download instructions can be found https://github.com/GreenleafLab/HDMA/blob/main/DATA.md |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| liu2026Multiomics_Eye_c14_mean_counts_contribs | float |
liu2026Multiomics_Eye_c14_mean_counts_contribs |
base-resolution contribution scores for the counts head of ChromBPNet as computed by DeepLIFT
|
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[-0.0366, 0.125] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 82355336 | 2.57% | 81628727 |
| chr1 | 8003948 | 3.21% | 7934340 |
| chr2 | 6422434 | 2.65% | 6365214 |
| chr3 | 4921902 | 2.48% | 4877267 |
| chr4 | 3569799 | 1.88% | 3535113 |
| chr5 | 4010373 | 2.21% | 3974185 |
| chr6 | 4512487 | 2.64% | 4471983 |
| chr7 | 4105830 | 2.58% | 4069435 |
| chr8 | 3337782 | 2.30% | 3307646 |
| chr9 | 3734940 | 2.70% | 3701601 |
| chr10 | 3810720 | 2.85% | 3777646 |
| chr11 | 4795560 | 3.55% | 4753701 |
| chr12 | 4107200 | 3.08% | 4070545 |
| chr13 | 1866722 | 1.63% | 1849593 |
| chr14 | 2648330 | 2.47% | 2625200 |
| chr15 | 2751377 | 2.70% | 2726695 |
| chr16 | 3097672 | 3.43% | 3071688 |
| chr17 | 4270682 | 5.13% | 4234656 |
| chr18 | 1575018 | 1.96% | 1560508 |
| chr19 | 3797223 | 6.48% | 3766983 |
| chr20 | 2303074 | 3.57% | 2283139 |
| chr21 | 879407 | 1.88% | 871432 |
| chr22 | 1826797 | 3.59% | 1811855 |
| chrX | 2001831 | 1.28% | 1984116 |
| chrY | 4228 | 0.01% | 4186 |
| 431 contigs with no values (121016273 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 81628727 | 1 | 936 | 1.01 | 1 |
Files
| Filename | Size | md5 |
|---|---|---|
| Eye_c14__mean_counts_contribs.bw | 506.0 MB | 909d071793241e2c5c65f7b92137050b |
| genomic_resource.yaml | 1.3 KB | 61d31215ac34728abe037ef1b1b4e89c |
| statistics/ |
