Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Eye/c14/obs_pval_signalcontent_copy
Type position_score
Version 0
Summary obs_pval_signal for Eye for cell cluster c14
Description
Labels
  • assay: SHARE-seq
  • cluster: Eye_c14
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Eye
  • processing_level: obs_pval
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Eye_c14_obs_pval_signal float

liu2026Multiomics_Eye_c14_obs_pval_signal

Macs2 p-value signal track for observed accessibility
HISTOGRAM FOR liu2026Multiomics_Eye_c14_obs_pval_signal [0, 478]
n
3,086,937,189
mean
0.604
sd
0.858

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 308693718996.19% 18415865
chr1 248946112 >99.99% 1671478
chr2 242158094 99.99% 1460014
chr3 198197707 99.95% 1175558
chr4 190203622 99.99% 975409
chr5 181303935 99.87% 982530
chr6 170741093 99.96% 1015984
chr7 159335893 99.99% 1013882
chr8 145077653 99.96% 800820
chr9 138211575 99.87% 812576
chr10 133787151 99.99% 848742
chr11 135076409 99.99% 1037249
chr12 133264615 99.99% 908701
chr13 114353778 99.99% 494977
chr14 106883681 99.85% 597243
chr15 101981138 99.99% 512277
chr16 90207668 99.86% 627903
chr17 83247354 99.99% 817148
chr18 80263240 99.86% 407196
chr19 58607600 99.98% 734253
chr20 64332881 99.83% 457025
chr21 46699965 99.98% 211910
chr22 50807841 99.98% 362764
chrX 156030832 99.99% 486806
chrY 57217352 99.98% 3420
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 18415865 1 30002546 167.62 55
global segment-length histogram

Files

Filename Size md5
Eye_c14__obs_pval_signal.bw 104.21 MB 988bc33ed0661b17221477985c2b4d13
genomic_resource.yaml 1.23 KB 563bd702ddde96a8992463fbd89b5a21
statistics/