Resource
| Id | summary/liu2026Multiomics/pseudobulk_accessibility/Eye/c15/mean_counts_contribs |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | mean_counts_contribs for Eye for cell cluster c15 |
| Description |
Downloaded from: https://zenodo.org/records/15066651. Description of the data and download instructions can be found https://github.com/GreenleafLab/HDMA/blob/main/DATA.md |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| liu2026Multiomics_Eye_c15_mean_counts_contribs | float |
liu2026Multiomics_Eye_c15_mean_counts_contribs |
base-resolution contribution scores for the counts head of ChromBPNet as computed by DeepLIFT
|
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[-0.0279, 0.0885] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 90591918 | 2.82% | 89824097 |
| chr1 | 8946211 | 3.59% | 8870532 |
| chr2 | 6926123 | 2.86% | 6867017 |
| chr3 | 5696569 | 2.87% | 5647055 |
| chr4 | 4114828 | 2.16% | 4077780 |
| chr5 | 4696406 | 2.59% | 4656050 |
| chr6 | 5025824 | 2.94% | 4983156 |
| chr7 | 4538249 | 2.85% | 4499073 |
| chr8 | 3767525 | 2.60% | 3735034 |
| chr9 | 4044953 | 2.92% | 4011069 |
| chr10 | 4133305 | 3.09% | 4098575 |
| chr11 | 5163644 | 3.82% | 5120355 |
| chr12 | 4384781 | 3.29% | 4348068 |
| chr13 | 2188925 | 1.91% | 2169952 |
| chr14 | 2850369 | 2.66% | 2826492 |
| chr15 | 2975718 | 2.92% | 2950519 |
| chr16 | 3295266 | 3.65% | 3268275 |
| chr17 | 4466853 | 5.37% | 4430421 |
| chr18 | 1933572 | 2.41% | 1915942 |
| chr19 | 3998442 | 6.82% | 3966032 |
| chr20 | 2420074 | 3.76% | 2400155 |
| chr21 | 953351 | 2.04% | 945332 |
| chr22 | 1927499 | 3.79% | 1911659 |
| chrX | 2137089 | 1.37% | 2119270 |
| chrY | 6342 | 0.01% | 6284 |
| 431 contigs with no values (121016273 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 89824097 | 1 | 956 | 1.01 | 1 |
Files
| Filename | Size | md5 |
|---|---|---|
| Eye_c15__mean_counts_contribs.bw | 556.57 MB | 1012012150212bbcdab8677ec0bc18e9 |
| genomic_resource.yaml | 1.3 KB | 55347052e4c4fe5bdcd8265d53cc0278 |
| statistics/ |
