Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Eye/c15/obs_pval_signalcontent_copy
Type position_score
Version 0
Summary obs_pval_signal for Eye for cell cluster c15
Description
Labels
  • assay: SHARE-seq
  • cluster: Eye_c15
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Eye
  • processing_level: obs_pval
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Eye_c15_obs_pval_signal float

liu2026Multiomics_Eye_c15_obs_pval_signal

Macs2 p-value signal track for observed accessibility
HISTOGRAM FOR liu2026Multiomics_Eye_c15_obs_pval_signal [0, 561]
n
3,087,027,769
mean
0.602
sd
0.924

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 308702776996.19% 24405811
chr1 248946190 >99.99% 2160664
chr2 242182546 >99.99% 1967301
chr3 198220542 99.96% 1616899
chr4 190179556 99.98% 1361581
chr5 181348650 99.90% 1388133
chr6 170741739 99.96% 1422346
chr7 159335937 99.99% 1285580
chr8 145075393 99.96% 1089329
chr9 138218272 99.87% 1033917
chr10 133787421 99.99% 1107439
chr11 135076577 99.99% 1318803
chr12 133264890 99.99% 1190926
chr13 114353253 99.99% 695901
chr14 106883423 99.85% 775195
chr15 101980982 99.99% 712342
chr16 90225526 99.88% 821311
chr17 83247265 99.99% 1011679
chr18 80263247 99.86% 586398
chr19 58607601 99.98% 876791
chr20 64332815 99.83% 590735
chr21 46699628 99.98% 285689
chr22 50808343 99.98% 446799
chrX 156030685 99.99% 654993
chrY 57217288 99.98% 5060
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 24405811 1 30010341 126.49 45
global segment-length histogram

Files

Filename Size md5
Eye_c15__obs_pval_signal.bw 137.98 MB 5c367807e85eb4b0dd0ddc4b6593b562
genomic_resource.yaml 1.23 KB f43db37dd6cfbc611f8f90d598cc48fd
statistics/