Resource
| Id | summary/liu2026Multiomics/pseudobulk_accessibility/Eye/c16/mean_counts_contribs |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | mean_counts_contribs for Eye for cell cluster c16 |
| Description |
Downloaded from: https://zenodo.org/records/15066651. Description of the data and download instructions can be found https://github.com/GreenleafLab/HDMA/blob/main/DATA.md |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| liu2026Multiomics_Eye_c16_mean_counts_contribs | float |
liu2026Multiomics_Eye_c16_mean_counts_contribs |
base-resolution contribution scores for the counts head of ChromBPNet as computed by DeepLIFT
|
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[-0.0343, 0.0736] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 89105153 | 2.78% | 88183900 |
| chr1 | 8345620 | 3.35% | 8261024 |
| chr2 | 7008765 | 2.89% | 6934532 |
| chr3 | 5800594 | 2.93% | 5739362 |
| chr4 | 4398900 | 2.31% | 4350281 |
| chr5 | 4890665 | 2.69% | 4838448 |
| chr6 | 5254509 | 3.08% | 5199178 |
| chr7 | 4634521 | 2.91% | 4585720 |
| chr8 | 4011880 | 2.76% | 3969307 |
| chr9 | 3818615 | 2.76% | 3779539 |
| chr10 | 4241756 | 3.17% | 4198113 |
| chr11 | 4801552 | 3.55% | 4752774 |
| chr12 | 4378526 | 3.29% | 4333099 |
| chr13 | 2169569 | 1.90% | 2146495 |
| chr14 | 2810543 | 2.63% | 2781863 |
| chr15 | 2873637 | 2.82% | 2844501 |
| chr16 | 2980012 | 3.30% | 2950936 |
| chr17 | 3911025 | 4.70% | 3873436 |
| chr18 | 1885462 | 2.35% | 1863379 |
| chr19 | 3601851 | 6.14% | 3568848 |
| chr20 | 2350362 | 3.65% | 2326855 |
| chr21 | 983784 | 2.11% | 972581 |
| chr22 | 1674451 | 3.29% | 1658396 |
| chrX | 2276440 | 1.46% | 2253150 |
| chrY | 2114 | <0.01% | 2083 |
| 431 contigs with no values (121016273 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 88183900 | 1 | 1002 | 1.01 | 1 |
Files
| Filename | Size | md5 |
|---|---|---|
| Eye_c16__mean_counts_contribs.bw | 547.5 MB | 6eba2e6b4fcb775f7652211604a1270e |
| genomic_resource.yaml | 1.3 KB | 9bf575b5a4e46cb3f67cfcea532c7197 |
| statistics/ |
