Resource
| Id | summary/liu2026Multiomics/pseudobulk_accessibility/Eye/c17/mean_counts_contribs |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | mean_counts_contribs for Eye for cell cluster c17 |
| Description |
Downloaded from: https://zenodo.org/records/15066651. Description of the data and download instructions can be found https://github.com/GreenleafLab/HDMA/blob/main/DATA.md |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| liu2026Multiomics_Eye_c17_mean_counts_contribs | float |
liu2026Multiomics_Eye_c17_mean_counts_contribs |
base-resolution contribution scores for the counts head of ChromBPNet as computed by DeepLIFT
|
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[-0.0337, 0.0844] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 85929360 | 2.68% | 85145731 |
| chr1 | 8339543 | 3.35% | 8263256 |
| chr2 | 6717681 | 2.77% | 6655317 |
| chr3 | 5383088 | 2.71% | 5332830 |
| chr4 | 4002096 | 2.10% | 3962477 |
| chr5 | 4722022 | 2.60% | 4677701 |
| chr6 | 4964809 | 2.91% | 4919065 |
| chr7 | 4509250 | 2.83% | 4467543 |
| chr8 | 3621986 | 2.50% | 3588452 |
| chr9 | 3640069 | 2.63% | 3606863 |
| chr10 | 4015213 | 3.00% | 3978728 |
| chr11 | 4676297 | 3.46% | 4634495 |
| chr12 | 4330015 | 3.25% | 4290521 |
| chr13 | 2158985 | 1.89% | 2138045 |
| chr14 | 2757163 | 2.58% | 2732311 |
| chr15 | 2852244 | 2.80% | 2826554 |
| chr16 | 2868905 | 3.18% | 2844433 |
| chr17 | 3851491 | 4.63% | 3818373 |
| chr18 | 1798303 | 2.24% | 1781498 |
| chr19 | 3734386 | 6.37% | 3704049 |
| chr20 | 2158750 | 3.35% | 2139502 |
| chr21 | 910533 | 1.95% | 902143 |
| chr22 | 1681980 | 3.31% | 1667520 |
| chrX | 2228209 | 1.43% | 2207771 |
| chrY | 6342 | 0.01% | 6284 |
| 431 contigs with no values (121016273 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 85145731 | 1 | 945 | 1.01 | 1 |
Files
| Filename | Size | md5 |
|---|---|---|
| Eye_c17__mean_counts_contribs.bw | 527.98 MB | 6f0abf3b66076a03cc84c2d76bc60489 |
| genomic_resource.yaml | 1.3 KB | 8003dd85a750bad23028a971dd50444e |
| statistics/ |
