Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Eye/c17/obs_pval_signalcontent_copy
Type position_score
Version 0
Summary obs_pval_signal for Eye for cell cluster c17
Description
Labels
  • assay: SHARE-seq
  • cluster: Eye_c17
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Eye
  • processing_level: obs_pval
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Eye_c17_obs_pval_signal float

liu2026Multiomics_Eye_c17_obs_pval_signal

Macs2 p-value signal track for observed accessibility
HISTOGRAM FOR liu2026Multiomics_Eye_c17_obs_pval_signal [0, 452]
n
3,087,193,885
mean
0.709
sd
0.659

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 308719388596.20% 17658686
chr1 248946300 >99.99% 1572266
chr2 242183500 >99.99% 1467576
chr3 198220291 99.96% 1188806
chr4 190203803 99.99% 979968
chr5 181477094 99.97% 1012125
chr6 170739199 99.96% 1020536
chr7 159335893 99.99% 937785
chr8 145076898 99.96% 814325
chr9 138237331 99.89% 756327
chr10 133787112 99.99% 803548
chr11 135076471 99.99% 927089
chr12 133264719 99.99% 870709
chr13 114353682 99.99% 493162
chr14 106883406 99.85% 561731
chr15 101981006 99.99% 514429
chr16 90226287 99.88% 571209
chr17 83247277 99.99% 709617
chr18 80263204 99.86% 411085
chr19 58607600 99.98% 631276
chr20 64329552 99.82% 415901
chr21 46697171 99.97% 197189
chr22 50808458 99.98% 304189
chrX 156030279 99.99% 493693
chrY 57217352 99.98% 4145
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 17658686 1 30014021 174.83 61
global segment-length histogram

Files

Filename Size md5
Eye_c17__obs_pval_signal.bw 98.51 MB 25b6fe8733c0bb1f38b78854c6e2c6ca
genomic_resource.yaml 1.23 KB 6b0513ce0cfe5b8ddda3f5a2556b6b43
statistics/