Resource
| Id | summary/liu2026Multiomics/pseudobulk_accessibility/Eye/c18/mean_counts_contribs |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | mean_counts_contribs for Eye for cell cluster c18 |
| Description |
Downloaded from: https://zenodo.org/records/15066651. Description of the data and download instructions can be found https://github.com/GreenleafLab/HDMA/blob/main/DATA.md |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| liu2026Multiomics_Eye_c18_mean_counts_contribs | float |
liu2026Multiomics_Eye_c18_mean_counts_contribs |
base-resolution contribution scores for the counts head of ChromBPNet as computed by DeepLIFT
|
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[-0.0336, 0.0809] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 84150511 | 2.62% | 83335423 |
| chr1 | 8125931 | 3.26% | 8046616 |
| chr2 | 6558556 | 2.71% | 6494205 |
| chr3 | 5356107 | 2.70% | 5302848 |
| chr4 | 3893490 | 2.05% | 3854519 |
| chr5 | 4244006 | 2.34% | 4202342 |
| chr6 | 5016548 | 2.94% | 4967990 |
| chr7 | 4317427 | 2.71% | 4275409 |
| chr8 | 3607689 | 2.49% | 3572204 |
| chr9 | 3660662 | 2.65% | 3625597 |
| chr10 | 3932661 | 2.94% | 3894111 |
| chr11 | 4713969 | 3.49% | 4668427 |
| chr12 | 4139011 | 3.11% | 4099219 |
| chr13 | 1941913 | 1.70% | 1922890 |
| chr14 | 2681982 | 2.51% | 2656412 |
| chr15 | 2645689 | 2.59% | 2620223 |
| chr16 | 2933553 | 3.25% | 2906067 |
| chr17 | 3942828 | 4.74% | 3905109 |
| chr18 | 1764002 | 2.19% | 1746423 |
| chr19 | 3868251 | 6.60% | 3833188 |
| chr20 | 2274641 | 3.53% | 2253096 |
| chr21 | 938077 | 2.01% | 928911 |
| chr22 | 1657463 | 3.26% | 1642097 |
| chrX | 1931827 | 1.24% | 1913322 |
| chrY | 4228 | 0.01% | 4198 |
| 431 contigs with no values (121016273 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 83335423 | 1 | 977 | 1.01 | 1 |
Files
| Filename | Size | md5 |
|---|---|---|
| Eye_c18__mean_counts_contribs.bw | 516.72 MB | 225fc67b8cf13417bae4700ed6b5f40a |
| genomic_resource.yaml | 1.3 KB | bd325806c0248cad888376dac24ce730 |
| statistics/ |
