Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Eye/c18/obs_pval_signalcontent_copy
Type position_score
Version 0
Summary obs_pval_signal for Eye for cell cluster c18
Description
Labels
  • assay: SHARE-seq
  • cluster: Eye_c18
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Eye
  • processing_level: obs_pval
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Eye_c18_obs_pval_signal float

liu2026Multiomics_Eye_c18_obs_pval_signal

Macs2 p-value signal track for observed accessibility
HISTOGRAM FOR liu2026Multiomics_Eye_c18_obs_pval_signal [0.00024, 358]
n
3,086,778,898
mean
0.599
sd
0.508

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 308677889896.18% 8952023
chr1 248946118 >99.99% 852402
chr2 242179662 99.99% 665196
chr3 198174083 99.94% 546507
chr4 190204251 99.99% 391473
chr5 181473622 99.96% 434348
chr6 170737530 99.96% 517837
chr7 159335836 99.99% 446248
chr8 145075220 99.96% 366827
chr9 138220654 99.87% 402288
chr10 133787439 99.99% 421173
chr11 135076067 99.99% 507402
chr12 133264684 99.99% 456459
chr13 114353550 99.99% 193731
chr14 106882977 99.85% 302122
chr15 101980983 99.99% 273284
chr16 90215254 99.86% 338057
chr17 83247307 99.99% 484957
chr18 80263234 99.86% 174860
chr19 58607600 99.98% 483827
chr20 64329552 99.82% 236428
chr21 46699828 99.98% 104492
chr22 50807973 99.98% 212788
chrX 155698282 99.78% 138924
chrY 57217192 99.98% 393
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 8952023 1 30092178 344.81 41
global segment-length histogram

Files

Filename Size md5
Eye_c18__obs_pval_signal.bw 50.34 MB 35e5d3807d7429d87552b846ac04a184
genomic_resource.yaml 1.23 KB ad7c16e00d49384fcec3188fd6b841ac
statistics/