Resource
| Id | summary/liu2026Multiomics/pseudobulk_accessibility/Eye/c2/mean_counts_contribs |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | mean_counts_contribs for Eye for cell cluster c2 |
| Description |
Downloaded from: https://zenodo.org/records/15066651. Description of the data and download instructions can be found https://github.com/GreenleafLab/HDMA/blob/main/DATA.md |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| liu2026Multiomics_Eye_c2_mean_counts_contribs | float |
liu2026Multiomics_Eye_c2_mean_counts_contribs |
base-resolution contribution scores for the counts head of ChromBPNet as computed by DeepLIFT
|
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[-0.0744, 0.219] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 140752050 | 4.39% | 139887329 |
| chr1 | 13580307 | 5.45% | 13496880 |
| chr2 | 10659361 | 4.40% | 10594030 |
| chr3 | 8475292 | 4.27% | 8422242 |
| chr4 | 6218082 | 3.27% | 6177207 |
| chr5 | 7488043 | 4.12% | 7442310 |
| chr6 | 7594024 | 4.45% | 7547688 |
| chr7 | 7277857 | 4.57% | 7232313 |
| chr8 | 6027894 | 4.15% | 5990550 |
| chr9 | 6064616 | 4.38% | 6026612 |
| chr10 | 6363493 | 4.76% | 6323813 |
| chr11 | 8290313 | 6.14% | 8240449 |
| chr12 | 6796790 | 5.10% | 6755538 |
| chr13 | 3405320 | 2.98% | 3384137 |
| chr14 | 4606881 | 4.30% | 4579268 |
| chr15 | 4818066 | 4.72% | 4788357 |
| chr16 | 5032235 | 5.57% | 5002314 |
| chr17 | 7064358 | 8.48% | 7022487 |
| chr18 | 3204692 | 3.99% | 3182684 |
| chr19 | 6005290 | 10.24% | 5970409 |
| chr20 | 4114984 | 6.39% | 4089896 |
| chr21 | 1447171 | 3.10% | 1438109 |
| chr22 | 2939986 | 5.79% | 2922552 |
| chrX | 3213842 | 2.06% | 3194688 |
| chrY | 63153 | 0.11% | 62796 |
| 431 contigs with no values (121016273 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 139887329 | 1 | 961 | 1.01 | 1 |
Files
| Filename | Size | md5 |
|---|---|---|
| Eye_c2__mean_counts_contribs.bw | 864.33 MB | a0a0a57a21e371862de266a7e8eba2e2 |
| genomic_resource.yaml | 1.3 KB | 7a2a0c71affe884276f9087eb99af0ea |
| statistics/ |
