Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Eye/c2/obs_pval_signalcontent_copy
Type position_score
Version 0
Summary obs_pval_signal for Eye for cell cluster c2
Description
Labels
  • assay: SHARE-seq
  • cluster: Eye_c2
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Eye
  • processing_level: obs_pval
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Eye_c2_obs_pval_signal float

liu2026Multiomics_Eye_c2_obs_pval_signal

Macs2 p-value signal track for observed accessibility
HISTOGRAM FOR liu2026Multiomics_Eye_c2_obs_pval_signal [0, 1.72e+03]
n
3,087,286,555
mean
0.509
sd
4.57

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 308728655596.20% 88116060
chr1 248946464 >99.99% 7744002
chr2 242183500 >99.99% 7233049
chr3 198220329 99.96% 5868215
chr4 190203978 99.99% 5010544
chr5 181477108 99.97% 5136643
chr6 170742099 99.96% 5064133
chr7 159335901 99.99% 4825321
chr8 145075964 99.96% 4130388
chr9 138318362 99.94% 3702455
chr10 133787415 99.99% 3982703
chr11 135076593 99.99% 4833797
chr12 133264786 99.99% 4300400
chr13 114354006 99.99% 2577117
chr14 106883709 99.85% 2909717
chr15 101981149 99.99% 2651740
chr16 90226373 99.88% 2829225
chr17 83247391 99.99% 3555643
chr18 80263248 99.86% 2173125
chr19 58607600 99.98% 2889238
chr20 64334061 99.83% 2189856
chr21 46699978 99.98% 961402
chr22 50808344 99.98% 1524623
chrX 156030846 99.99% 1964831
chrY 57217351 99.98% 57893
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 88116060 1 30004522 35.04 12
global segment-length histogram

Files

Filename Size md5
Eye_c2__obs_pval_signal.bw 508.04 MB bb8a763a93a6d2501e5ca60a2dff34e8
genomic_resource.yaml 1.22 KB 8afd1c7e458c2336c2d3983da9db6e46
statistics/