Resource
| Id | summary/liu2026Multiomics/pseudobulk_accessibility/Eye/c3/mean_counts_contribs |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | mean_counts_contribs for Eye for cell cluster c3 |
| Description |
Downloaded from: https://zenodo.org/records/15066651. Description of the data and download instructions can be found https://github.com/GreenleafLab/HDMA/blob/main/DATA.md |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| liu2026Multiomics_Eye_c3_mean_counts_contribs | float |
liu2026Multiomics_Eye_c3_mean_counts_contribs |
base-resolution contribution scores for the counts head of ChromBPNet as computed by DeepLIFT
|
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[-0.0657, 0.182] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 149036476 | 4.64% | 148028150 |
| chr1 | 14074452 | 5.65% | 13978873 |
| chr2 | 11642495 | 4.81% | 11563346 |
| chr3 | 8696513 | 4.39% | 8636116 |
| chr4 | 6863200 | 3.61% | 6813982 |
| chr5 | 7865281 | 4.33% | 7811276 |
| chr6 | 8406836 | 4.92% | 8348730 |
| chr7 | 7813936 | 4.90% | 7759953 |
| chr8 | 6525266 | 4.50% | 6480663 |
| chr9 | 6404183 | 4.63% | 6361269 |
| chr10 | 7228222 | 5.40% | 7179401 |
| chr11 | 8509576 | 6.30% | 8453761 |
| chr12 | 7328422 | 5.50% | 7278474 |
| chr13 | 3753968 | 3.28% | 3726849 |
| chr14 | 4745583 | 4.43% | 4713700 |
| chr15 | 4886254 | 4.79% | 4853107 |
| chr16 | 5293743 | 5.86% | 5259555 |
| chr17 | 7045075 | 8.46% | 6999541 |
| chr18 | 3580408 | 4.45% | 3554274 |
| chr19 | 5940591 | 10.13% | 5903766 |
| chr20 | 4332783 | 6.72% | 4304759 |
| chr21 | 1751115 | 3.75% | 1739241 |
| chr22 | 3093351 | 6.09% | 3073612 |
| chrX | 3210808 | 2.06% | 3189767 |
| chrY | 44415 | 0.08% | 44135 |
| 431 contigs with no values (121016273 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 148028150 | 1 | 949 | 1.01 | 1 |
Files
| Filename | Size | md5 |
|---|---|---|
| Eye_c3__mean_counts_contribs.bw | 915.91 MB | 3950297ddbd07192e03c58f92f50c6af |
| genomic_resource.yaml | 1.3 KB | baa5b6700c1dd8061c2a6c05c819f27d |
| statistics/ |
