Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Eye/c3/obs_pval_signalcontent_copy
Type position_score
Version 0
Summary obs_pval_signal for Eye for cell cluster c3
Description
Labels
  • assay: SHARE-seq
  • cluster: Eye_c3
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Eye
  • processing_level: obs_pval
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Eye_c3_obs_pval_signal float

liu2026Multiomics_Eye_c3_obs_pval_signal

Macs2 p-value signal track for observed accessibility
HISTOGRAM FOR liu2026Multiomics_Eye_c3_obs_pval_signal [0, 1.32e+03]
n
3,087,242,371
mean
0.492
sd
3.33

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 308724237196.20% 81099196
chr1 248946456 >99.99% 7154107
chr2 242183488 >99.99% 6626299
chr3 198220306 99.96% 5215830
chr4 190203749 99.99% 4516157
chr5 181473737 99.96% 4588068
chr6 170739963 99.96% 4582197
chr7 159335680 99.99% 4437860
chr8 145076653 99.96% 3827382
chr9 138281442 99.92% 3413479
chr10 133787439 99.99% 3861355
chr11 135076593 99.99% 4546199
chr12 133264895 99.99% 4031726
chr13 114354047 99.99% 2306455
chr14 106883650 99.85% 2610260
chr15 101981166 99.99% 2290174
chr16 90224705 99.87% 2580230
chr17 83247307 99.99% 3267528
chr18 80263246 99.86% 1983440
chr19 58607600 99.98% 2678902
chr20 64333754 99.83% 2118376
chr21 46699959 99.98% 949526
chr22 50808460 99.98% 1516891
chrX 156030781 99.99% 1945886
chrY 57217295 99.98% 50869
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 81099196 1 30004838 38.07 13
global segment-length histogram

Files

Filename Size md5
Eye_c3__obs_pval_signal.bw 470.77 MB 9403edfbd0b4a3ad29c61f42aafbb803
genomic_resource.yaml 1.22 KB 1d8942e2f5cf5af5e99ee7f3a6603777
statistics/