Resource
| Id | summary/liu2026Multiomics/pseudobulk_accessibility/Eye/c4/mean_counts_contribs |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | mean_counts_contribs for Eye for cell cluster c4 |
| Description |
Downloaded from: https://zenodo.org/records/15066651. Description of the data and download instructions can be found https://github.com/GreenleafLab/HDMA/blob/main/DATA.md |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| liu2026Multiomics_Eye_c4_mean_counts_contribs | float |
liu2026Multiomics_Eye_c4_mean_counts_contribs |
base-resolution contribution scores for the counts head of ChromBPNet as computed by DeepLIFT
|
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[-0.0575, 0.116] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 117578519 | 3.66% | 116650296 |
| chr1 | 11382108 | 4.57% | 11292980 |
| chr2 | 9082277 | 3.75% | 9009783 |
| chr3 | 7243653 | 3.65% | 7184815 |
| chr4 | 5432876 | 2.86% | 5386688 |
| chr5 | 6226677 | 3.43% | 6176879 |
| chr6 | 7042454 | 4.12% | 6986584 |
| chr7 | 5795784 | 3.64% | 5749576 |
| chr8 | 5113688 | 3.52% | 5072688 |
| chr9 | 5199677 | 3.76% | 5158548 |
| chr10 | 5701560 | 4.26% | 5656107 |
| chr11 | 6568502 | 4.86% | 6518324 |
| chr12 | 5826231 | 4.37% | 5780799 |
| chr13 | 2803870 | 2.45% | 2780924 |
| chr14 | 3821963 | 3.57% | 3791914 |
| chr15 | 3925824 | 3.85% | 3894793 |
| chr16 | 4045270 | 4.48% | 4014573 |
| chr17 | 5567299 | 6.69% | 5526034 |
| chr18 | 2344436 | 2.92% | 2324026 |
| chr19 | 4873589 | 8.31% | 4839485 |
| chr20 | 3187096 | 4.95% | 3162756 |
| chr21 | 1362884 | 2.92% | 1351614 |
| chr22 | 2296360 | 4.52% | 2279183 |
| chrX | 2718732 | 1.74% | 2697725 |
| chrY | 15709 | 0.03% | 13498 |
| 431 contigs with no values (121016273 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 116650296 | 1 | 2114 | 1.01 | 1 |
Files
| Filename | Size | md5 |
|---|---|---|
| Eye_c4__mean_counts_contribs.bw | 723.12 MB | a1605cfd8ee49ec7788d7c1e32cbf006 |
| genomic_resource.yaml | 1.3 KB | d9f97692689529664943215e3aafbde5 |
| statistics/ |
