Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Eye/c4/obs_pval_signalcontent_copy
Type position_score
Version 0
Summary obs_pval_signal for Eye for cell cluster c4
Description
Labels
  • assay: SHARE-seq
  • cluster: Eye_c4
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Eye
  • processing_level: obs_pval
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Eye_c4_obs_pval_signal float

liu2026Multiomics_Eye_c4_obs_pval_signal
Macs2 p-value signal track for observed accessibility
 HISTOGRAM FOR liu2026Multiomics_Eye_c4_obs_pval_signal [0, 1.99e+03]
n
3,087,176,756
mean
0.404
sd
2.12

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 308717675696.20% 51250614
chr1 248946432 >99.99% 4658160
chr2 242183500 >99.99% 4098412
chr3 198193995 99.95% 3404563
chr4 190204555 99.99% 2705435
chr5 181477206 99.97% 2895904
chr6 170742110 99.96% 3042057
chr7 159335891 99.99% 2682912
chr8 145075513 99.96% 2276485
chr9 138237367 99.89% 2223553
chr10 133787435 99.99% 2437860
chr11 135076084 99.99% 2769426
chr12 133264907 99.99% 2544850
chr13 114353928 99.99% 1366231
chr14 106883565 99.85% 1628891
chr15 101981155 99.99% 1494207
chr16 90224736 99.87% 1707735
chr17 83247314 99.99% 2202093
chr18 80263246 99.86% 1114839
chr19 58607600 99.98% 1938548
chr20 64333702 99.83% 1266791
chr21 46699959 99.98% 607584
chr22 50808358 99.98% 973318
chrX 156030846 99.99% 1207332
chrY 57217352 99.98% 3428
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 51250614 1 30006320 60.24 16
global segment-length histogram

Files

Filename Size md5
Eye_c4__obs_pval_signal.bw 290.92 MB 4bedd2d6551b4aa369593d198043272d
genomic_resource.yaml 1.22 KB 63b1f54e59d166e5b8de7d8ce3623c32
statistics/