Resource
| Id | summary/liu2026Multiomics/pseudobulk_accessibility/Eye/c5/mean_counts_contribs |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | mean_counts_contribs for Eye for cell cluster c5 |
| Description |
Downloaded from: https://zenodo.org/records/15066651. Description of the data and download instructions can be found https://github.com/GreenleafLab/HDMA/blob/main/DATA.md |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| liu2026Multiomics_Eye_c5_mean_counts_contribs | float |
liu2026Multiomics_Eye_c5_mean_counts_contribs |
base-resolution contribution scores for the counts head of ChromBPNet as computed by DeepLIFT
|
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[-0.0543, 0.161] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 158627545 | 4.94% | 157635437 |
| chr1 | 15523868 | 6.24% | 15427082 |
| chr2 | 12689376 | 5.24% | 12610432 |
| chr3 | 10177056 | 5.13% | 10112932 |
| chr4 | 7485836 | 3.94% | 7437952 |
| chr5 | 8415866 | 4.64% | 8362890 |
| chr6 | 9123644 | 5.34% | 9066792 |
| chr7 | 8009575 | 5.03% | 7959124 |
| chr8 | 6749526 | 4.65% | 6707748 |
| chr9 | 7085857 | 5.12% | 7041689 |
| chr10 | 7624113 | 5.70% | 7575025 |
| chr11 | 8885723 | 6.58% | 8831198 |
| chr12 | 7580865 | 5.69% | 7533720 |
| chr13 | 3860372 | 3.38% | 3836048 |
| chr14 | 4999731 | 4.67% | 4969377 |
| chr15 | 5219444 | 5.12% | 5186361 |
| chr16 | 5312179 | 5.88% | 5279903 |
| chr17 | 7538398 | 9.05% | 7491526 |
| chr18 | 3396162 | 4.23% | 3373194 |
| chr19 | 5873447 | 10.02% | 5837423 |
| chr20 | 4259721 | 6.61% | 4233195 |
| chr21 | 1816466 | 3.89% | 1804501 |
| chr22 | 3390424 | 6.67% | 3369540 |
| chrX | 3600761 | 2.31% | 3578706 |
| chrY | 9135 | 0.02% | 9079 |
| 431 contigs with no values (121016273 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 157635437 | 1 | 990 | 1.01 | 1 |
Files
| Filename | Size | md5 |
|---|---|---|
| Eye_c5__mean_counts_contribs.bw | 975.14 MB | 212eec83253f9c998256146b1e7b81d7 |
| genomic_resource.yaml | 1.3 KB | d505bb69de9fc6caf3c612b066a46daa |
| statistics/ |
