Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Eye/c5/obs_pval_signalcontent_copy
Type position_score
Version 0
Summary obs_pval_signal for Eye for cell cluster c5
Description
Labels
  • assay: SHARE-seq
  • cluster: Eye_c5
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Eye
  • processing_level: obs_pval
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Eye_c5_obs_pval_signal float

liu2026Multiomics_Eye_c5_obs_pval_signal

Macs2 p-value signal track for observed accessibility
HISTOGRAM FOR liu2026Multiomics_Eye_c5_obs_pval_signal [0, 2.73e+03]
n
3,087,274,304
mean
0.426
sd
3.1

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 308727430496.20% 60451398
chr1 248946450 >99.99% 5538570
chr2 242183502 >99.99% 4836244
chr3 198215443 99.96% 3947446
chr4 190204535 99.99% 3259712
chr5 181477715 99.97% 3284980
chr6 170742257 99.96% 3392555
chr7 159335901 99.99% 3203811
chr8 145077812 99.96% 2641483
chr9 138310000 99.94% 2569758
chr10 133787441 99.99% 2842645
chr11 135076543 99.99% 3318857
chr12 133264714 99.99% 2898532
chr13 114354028 99.99% 1620851
chr14 106883565 99.85% 1965750
chr15 101981155 99.99% 1771246
chr16 90225127 99.87% 2017840
chr17 83247360 99.99% 2690233
chr18 80263246 99.86% 1369565
chr19 58607600 99.98% 2240429
chr20 64333452 99.83% 1505362
chr21 46699923 99.98% 690247
chr22 50808344 99.98% 1230184
chrX 156030832 99.99% 1600554
chrY 57217359 99.98% 14544
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 60451398 1 30006292 51.07 16
global segment-length histogram

Files

Filename Size md5
Eye_c5__obs_pval_signal.bw 349.87 MB 9543bdd385e024945833f633d8ace38e
genomic_resource.yaml 1.22 KB 53699894fd5b2be93f80046b090885a6
statistics/