Resource
| Id | summary/liu2026Multiomics/pseudobulk_accessibility/Eye/c6/mean_counts_contribs |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | mean_counts_contribs for Eye for cell cluster c6 |
| Description |
Downloaded from: https://zenodo.org/records/15066651. Description of the data and download instructions can be found https://github.com/GreenleafLab/HDMA/blob/main/DATA.md |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| liu2026Multiomics_Eye_c6_mean_counts_contribs | float |
liu2026Multiomics_Eye_c6_mean_counts_contribs |
base-resolution contribution scores for the counts head of ChromBPNet as computed by DeepLIFT
|
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[-0.0626, 0.167] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 187859672 | 5.85% | 186585042 |
| chr1 | 16678936 | 6.70% | 16566796 |
| chr2 | 15207442 | 6.28% | 15104387 |
| chr3 | 12114334 | 6.11% | 12029675 |
| chr4 | 9844694 | 5.18% | 9773197 |
| chr5 | 11035800 | 6.08% | 10960021 |
| chr6 | 11055516 | 6.47% | 10979928 |
| chr7 | 10037004 | 6.30% | 9967923 |
| chr8 | 9209824 | 6.35% | 9147039 |
| chr9 | 8018852 | 5.79% | 7963304 |
| chr10 | 9095351 | 6.80% | 9033524 |
| chr11 | 10196843 | 7.55% | 10130284 |
| chr12 | 9013889 | 6.76% | 8952258 |
| chr13 | 5545033 | 4.85% | 5505948 |
| chr14 | 5786621 | 5.41% | 5748109 |
| chr15 | 5929967 | 5.81% | 5890054 |
| chr16 | 6338547 | 7.02% | 6297015 |
| chr17 | 7456657 | 8.96% | 7408495 |
| chr18 | 5042588 | 6.27% | 5007406 |
| chr19 | 5726892 | 9.77% | 5691306 |
| chr20 | 4872748 | 7.56% | 4839940 |
| chr21 | 2144013 | 4.59% | 2129546 |
| chr22 | 3350223 | 6.59% | 3328803 |
| chrX | 4151287 | 2.66% | 4123529 |
| chrY | 6611 | 0.01% | 6555 |
| 431 contigs with no values (121016273 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 186585042 | 1 | 961 | 1.01 | 1 |
Files
| Filename | Size | md5 |
|---|---|---|
| Eye_c6__mean_counts_contribs.bw | 1.13 GB | 81a1dd8bef766d1da5ddc04329ad56a7 |
| genomic_resource.yaml | 1.3 KB | ffe7b26109f4a33a38499dda57b825c4 |
| statistics/ |
