Resource
| Id | summary/liu2026Multiomics/pseudobulk_accessibility/Eye/c7/mean_counts_contribs |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | mean_counts_contribs for Eye for cell cluster c7 |
| Description |
Downloaded from: https://zenodo.org/records/15066651. Description of the data and download instructions can be found https://github.com/GreenleafLab/HDMA/blob/main/DATA.md |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| liu2026Multiomics_Eye_c7_mean_counts_contribs | float |
liu2026Multiomics_Eye_c7_mean_counts_contribs |
base-resolution contribution scores for the counts head of ChromBPNet as computed by DeepLIFT
|
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[-0.0626, 0.153] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 132591699 | 4.13% | 131726227 |
| chr1 | 12810772 | 5.15% | 12727134 |
| chr2 | 10200135 | 4.21% | 10132450 |
| chr3 | 7856557 | 3.96% | 7803556 |
| chr4 | 5874261 | 3.09% | 5834086 |
| chr5 | 7075691 | 3.90% | 7028535 |
| chr6 | 7169833 | 4.20% | 7122285 |
| chr7 | 6889208 | 4.32% | 6843099 |
| chr8 | 5836429 | 4.02% | 5797512 |
| chr9 | 5762991 | 4.16% | 5725210 |
| chr10 | 6126147 | 4.58% | 6085395 |
| chr11 | 7546746 | 5.59% | 7498755 |
| chr12 | 6538036 | 4.91% | 6495669 |
| chr13 | 3214278 | 2.81% | 3192059 |
| chr14 | 4416681 | 4.13% | 4388203 |
| chr15 | 4522758 | 4.43% | 4494025 |
| chr16 | 4723524 | 5.23% | 4694258 |
| chr17 | 6635257 | 7.97% | 6594313 |
| chr18 | 2926930 | 3.64% | 2905678 |
| chr19 | 5528673 | 9.43% | 5496085 |
| chr20 | 3867060 | 6.00% | 3842554 |
| chr21 | 1379089 | 2.95% | 1369972 |
| chr22 | 2795769 | 5.50% | 2778860 |
| chrX | 2826177 | 1.81% | 2808300 |
| chrY | 68697 | 0.12% | 68234 |
| 431 contigs with no values (121016273 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 131726227 | 1 | 935 | 1.01 | 1 |
Files
| Filename | Size | md5 |
|---|---|---|
| Eye_c7__mean_counts_contribs.bw | 814.62 MB | 542c676d4f4305f3b8c265c2610ee67f |
| genomic_resource.yaml | 1.3 KB | adb58de0aa22f06138904cbae031a1b6 |
| statistics/ |
