Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Eye/c7/obs_pval_signalcontent_copy
Type position_score
Version 0
Summary obs_pval_signal for Eye for cell cluster c7
Description
Labels
  • assay: SHARE-seq
  • cluster: Eye_c7
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Eye
  • processing_level: obs_pval
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Eye_c7_obs_pval_signal float

liu2026Multiomics_Eye_c7_obs_pval_signal

Macs2 p-value signal track for observed accessibility
HISTOGRAM FOR liu2026Multiomics_Eye_c7_obs_pval_signal [0, 771]
n
3,087,177,853
mean
0.343
sd
2.37

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 308717785396.20% 42815553
chr1 248946450 >99.99% 3956808
chr2 242183152 >99.99% 3374224
chr3 198220296 99.96% 2681276
chr4 190204569 99.99% 2128440
chr5 181459902 99.96% 2320404
chr6 170740175 99.96% 2318121
chr7 159335901 99.99% 2353725
chr8 145075663 99.96% 1919932
chr9 138237121 99.89% 1875486
chr10 133787439 99.99% 1956869
chr11 135076501 99.99% 2468911
chr12 133264545 99.99% 2178023
chr13 114353770 99.99% 1082382
chr14 106883253 99.85% 1482914
chr15 101981155 99.99% 1304493
chr16 90226289 99.88% 1467020
chr17 83240589 99.98% 2050956
chr18 80263240 99.86% 1012500
chr19 58607600 99.98% 1745369
chr20 64333758 99.83% 1159477
chr21 46699959 99.98% 458110
chr22 50808458 99.98% 844839
chrX 156030768 99.99% 662079
chrY 57217300 99.98% 13195
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 42815553 1 30013139 72.1 13
global segment-length histogram

Files

Filename Size md5
Eye_c7__obs_pval_signal.bw 247.77 MB 0723e881d04c829de7f6db6c8251192f
genomic_resource.yaml 1.22 KB 2c0d0049d7baeee48ee56e6e19211134
statistics/