Resource
| Id | summary/liu2026Multiomics/pseudobulk_accessibility/Eye/c8/mean_counts_contribs |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | mean_counts_contribs for Eye for cell cluster c8 |
| Description |
Downloaded from: https://zenodo.org/records/15066651. Description of the data and download instructions can be found https://github.com/GreenleafLab/HDMA/blob/main/DATA.md |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| liu2026Multiomics_Eye_c8_mean_counts_contribs | float |
liu2026Multiomics_Eye_c8_mean_counts_contribs |
base-resolution contribution scores for the counts head of ChromBPNet as computed by DeepLIFT
|
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[-0.0573, 0.208] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 115710056 | 3.61% | 114876082 |
| chr1 | 11263842 | 4.52% | 11183638 |
| chr2 | 8665887 | 3.58% | 8603664 |
| chr3 | 6966077 | 3.51% | 6915475 |
| chr4 | 5021328 | 2.64% | 4983019 |
| chr5 | 6439105 | 3.55% | 6391859 |
| chr6 | 6270851 | 3.67% | 6225176 |
| chr7 | 5940600 | 3.73% | 5897144 |
| chr8 | 4932494 | 3.40% | 4896586 |
| chr9 | 5083353 | 3.67% | 5046577 |
| chr10 | 5163955 | 3.86% | 5126037 |
| chr11 | 6554819 | 4.85% | 6508847 |
| chr12 | 5692931 | 4.27% | 5651936 |
| chr13 | 2839781 | 2.48% | 2818513 |
| chr14 | 3845736 | 3.59% | 3818421 |
| chr15 | 3859257 | 3.78% | 3831351 |
| chr16 | 4102482 | 4.54% | 4073753 |
| chr17 | 5832490 | 7.01% | 5791593 |
| chr18 | 2555044 | 3.18% | 2535412 |
| chr19 | 5151387 | 8.79% | 5116064 |
| chr20 | 3302877 | 5.13% | 3279702 |
| chr21 | 1232159 | 2.64% | 1223026 |
| chr22 | 2363729 | 4.65% | 2347046 |
| chrX | 2607463 | 1.67% | 2589007 |
| chrY | 22409 | 0.04% | 22236 |
| 431 contigs with no values (121016273 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 114876082 | 1 | 951 | 1.01 | 1 |
Files
| Filename | Size | md5 |
|---|---|---|
| Eye_c8__mean_counts_contribs.bw | 710.29 MB | 656e4e4c4264a3faa1c5d1985da0731c |
| genomic_resource.yaml | 1.3 KB | a4f8667a6294be03974c6db42d789d67 |
| statistics/ |
