Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Heart/c0/mean_counts_contribscontent_copy
Type position_score
Version 0
Summary mean_counts_contribs for Heart for cell cluster c0
Description
Labels
  • assay: SHARE-seq
  • cluster: Heart_c0
  • data_types: atac_contribution
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Heart
  • processing_level: contribution_scores
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Heart_c0_mean_counts_contribs float

liu2026Multiomics_Heart_c0_mean_counts_contribs

base-resolution contribution scores for the counts head of ChromBPNet as computed by DeepLIFT
HISTOGRAM FOR liu2026Multiomics_Heart_c0_mean_counts_contribs [-0.106, 0.295]
n
286,271,306
mean
0.000473
sd
0.00527

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 2862713068.92% 285042560
chr1 27146748 10.90% 27031127
chr2 23981117 9.90% 23879971
chr3 19788930 9.98% 19704590
chr4 15416996 8.11% 15348343
chr5 17014782 9.37% 16942416
chr6 17542111 10.27% 17467312
chr7 15202159 9.54% 15135990
chr8 13390714 9.23% 13333745
chr9 11745157 8.49% 11693813
chr10 14304722 10.69% 14243942
chr11 14634023 10.83% 14571933
chr12 13534274 10.16% 13476327
chr13 8144815 7.12% 8108956
chr14 8168537 7.63% 8134095
chr15 9782025 9.59% 9740476
chr16 8327580 9.22% 8290903
chr17 10776370 12.94% 10730095
chr18 6965301 8.67% 6935064
chr19 8037875 13.71% 8002858
chr20 6648719 10.32% 6620280
chr21 2979915 6.38% 2966644
chr22 5386515 10.60% 5364073
chrX 7327464 4.70% 7295280
chrY 24457 0.04% 24327
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 285042560 1 959 1 1
global segment-length histogram

Files

Filename Size md5
Heart_c0__mean_counts_contribs.bw 1.72 GB 35255a77640ecc1604e151a23faec584
genomic_resource.yaml 1.31 KB 8f2dcdde32945f73eae83908a43d32ee
statistics/