Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Heart/c1/mean_counts_contribscontent_copy
Type position_score
Version 0
Summary mean_counts_contribs for Heart for cell cluster c1
Description
Labels
  • assay: SHARE-seq
  • cluster: Heart_c1
  • data_types: atac_contribution
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Heart
  • processing_level: contribution_scores
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Heart_c1_mean_counts_contribs float

liu2026Multiomics_Heart_c1_mean_counts_contribs

base-resolution contribution scores for the counts head of ChromBPNet as computed by DeepLIFT
HISTOGRAM FOR liu2026Multiomics_Heart_c1_mean_counts_contribs [-0.0918, 0.264]
n
325,777,866
mean
0.00041
sd
0.00444

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 32577786610.15% 324222145
chr1 30537239 12.27% 30392051
chr2 27441497 11.33% 27310556
chr3 22248470 11.22% 22142228
chr4 16908406 8.89% 16824146
chr5 19161650 10.56% 19069938
chr6 19715021 11.54% 19620845
chr7 17130315 10.75% 17047123
chr8 15309429 10.55% 15236021
chr9 13553836 9.79% 13488725
chr10 16580122 12.39% 16501650
chr11 16790545 12.43% 16711808
chr12 15732817 11.80% 15657390
chr13 9205554 8.05% 9160739
chr14 9522241 8.90% 9477333
chr15 10970317 10.76% 10918536
chr16 9863094 10.92% 9816326
chr17 12653538 15.20% 12594262
chr18 7842969 9.76% 7805213
chr19 9191545 15.68% 9148878
chr20 8086007 12.55% 8047870
chr21 3567506 7.64% 3550060
chr22 6128292 12.06% 6100325
chrX 7462972 4.78% 7426465
chrY 174484 0.30% 173657
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 324222145 1 931 1 1
global segment-length histogram

Files

Filename Size md5
Heart_c1__mean_counts_contribs.bw 1.96 GB 047048f7071fa1f58d1180ae65bf43db
genomic_resource.yaml 1.31 KB 6420607068cf90804d1c6356d96bee3c
statistics/