Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Heart/c1/mean_pred_correctedcontent_copy
Type position_score
Version 0
Summary mean_pred_corrected for Heart for cell cluster c1
Description
Labels
  • assay: SHARE-seq
  • cluster: Heart_c1
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Heart
  • processing_level: phred_normalized
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Heart_c1_mean_pred_corrected float

liu2026Multiomics_Heart_c1_mean_pred_corrected

bias-corrected accessibility predicted by ChromBPNet
HISTOGRAM FOR liu2026Multiomics_Heart_c1_mean_pred_corrected [0.0003, 202]
n
180,408,997
mean
0.969
sd
2.79

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1804089975.62% 180408721
chr1 16991594 6.83% 16991574
chr2 15156603 6.26% 15156584
chr3 12292261 6.20% 12292234
chr4 9278056 4.88% 9278045
chr5 10595838 5.84% 10595819
chr6 10932375 6.40% 10932358
chr7 9426829 5.92% 9426802
chr8 8424389 5.80% 8424373
chr9 7508452 5.43% 7508445
chr10 9220077 6.89% 9220060
chr11 9342164 6.92% 9342148
chr12 8727807 6.55% 8727797
chr13 5055315 4.42% 5055308
chr14 5291648 4.94% 5291643
chr15 6097437 5.98% 6097428
chr16 5464183 6.05% 5464172
chr17 7105515 8.53% 7105507
chr18 4318260 5.37% 4318252
chr19 5179566 8.84% 5179559
chr20 4449111 6.90% 4449105
chr21 1958448 4.19% 1958444
chr22 3411556 6.71% 3411554
chrX 4083650 2.62% 4083647
chrY 97863 0.17% 97863
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 180408721 1 2 1 1
global segment-length histogram

Files

Filename Size md5
Heart_c1__mean_pred_corrected.bw 1.33 GB f3566e361b9ebbfa32a2cd5e273e3ec1
genomic_resource.yaml 1.27 KB bb014fe965f75e293148b6a351b19acd
statistics/