Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Heart/c10/mean_counts_contribscontent_copy
Type position_score
Version 0
Summary mean_counts_contribs for Heart for cell cluster c10
Description
Labels
  • assay: SHARE-seq
  • cluster: Heart_c10
  • data_types: atac_contribution
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Heart
  • processing_level: contribution_scores
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Heart_c10_mean_counts_contribs float

liu2026Multiomics_Heart_c10_mean_counts_contribs
base-resolution contribution scores for the counts head of ChromBPNet as computed by DeepLIFT
 HISTOGRAM FOR liu2026Multiomics_Heart_c10_mean_counts_contribs [-0.0977, 0.202]
n
241,786,831
mean
0.000337
sd
0.00413

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 2417868317.53% 240313250
chr1 22307527 8.96% 22172318
chr2 20337250 8.40% 20213272
chr3 16537029 8.34% 16436359
chr4 12650009 6.65% 12570181
chr5 14319366 7.89% 14231949
chr6 14798880 8.66% 14708022
chr7 12731618 7.99% 12653221
chr8 11380973 7.84% 11311050
chr9 10136148 7.32% 10074498
chr10 12206375 9.12% 12133131
chr11 12553354 9.29% 12478019
chr12 11717475 8.79% 11645833
chr13 7035036 6.15% 6991011
chr14 6999830 6.54% 6957373
chr15 8056100 7.90% 8007088
chr16 7096253 7.86% 7054139
chr17 9274922 11.14% 9219471
chr18 6056615 7.54% 6019167
chr19 6839798 11.67% 6799149
chr20 5874184 9.12% 5838887
chr21 2747509 5.88% 2730285
chr22 4289601 8.44% 4264233
chrX 5735202 3.68% 5699419
chrY 105777 0.18% 105175
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 240313250 1 942 1.01 1
global segment-length histogram

Files

Filename Size md5
Heart_c10__mean_counts_contribs.bw 1.45 GB d57f82de2fbf2e053d4fe1d5f1b17bb2
genomic_resource.yaml 1.31 KB 46c2ded27cac8a60ba707c42399118bf
statistics/