Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Heart/c11/mean_counts_contribscontent_copy
Type position_score
Version 0
Summary mean_counts_contribs for Heart for cell cluster c11
Description
Labels
  • assay: SHARE-seq
  • cluster: Heart_c11
  • data_types: atac_contribution
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Heart
  • processing_level: contribution_scores
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Heart_c11_mean_counts_contribs float

liu2026Multiomics_Heart_c11_mean_counts_contribs

base-resolution contribution scores for the counts head of ChromBPNet as computed by DeepLIFT
HISTOGRAM FOR liu2026Multiomics_Heart_c11_mean_counts_contribs [-0.1, 0.198]
n
244,545,795
mean
0.000373
sd
0.00429

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 2445457957.62% 243051459
chr1 22822185 9.17% 22683980
chr2 20156903 8.32% 20033343
chr3 16464084 8.30% 16362583
chr4 12494700 6.57% 12414759
chr5 14105479 7.77% 14018741
chr6 14738964 8.63% 14648511
chr7 12940633 8.12% 12860217
chr8 11461240 7.90% 11391103
chr9 10212717 7.38% 10150238
chr10 12408371 9.27% 12333494
chr11 12604673 9.33% 12529162
chr12 11883773 8.92% 11810118
chr13 6883827 6.02% 6840447
chr14 7100657 6.63% 7057520
chr15 8037729 7.88% 7989108
chr16 7678073 8.50% 7632579
chr17 9837963 11.82% 9778849
chr18 5758914 7.17% 5723097
chr19 7357887 12.55% 7314967
chr20 6304363 9.78% 6266744
chr21 2770320 5.93% 2753063
chr22 4576853 9.01% 4550139
chrX 5854463 3.75% 5818227
chrY 91024 0.16% 90470
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 243051459 1 943 1.01 1
global segment-length histogram

Files

Filename Size md5
Heart_c11__mean_counts_contribs.bw 1.47 GB 6318e12b1b3f9e34917ad4880dec93c7
genomic_resource.yaml 1.31 KB 3a54a1b1978e82beb496990992c6549d
statistics/