Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Heart/c11/mean_pred_correctedcontent_copy
Type position_score
Version 0
Summary mean_pred_corrected for Heart for cell cluster c11
Description
Labels
  • assay: SHARE-seq
  • cluster: Heart_c11
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Heart
  • processing_level: phred_normalized
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Heart_c11_mean_pred_corrected float

liu2026Multiomics_Heart_c11_mean_pred_corrected

bias-corrected accessibility predicted by ChromBPNet
HISTOGRAM FOR liu2026Multiomics_Heart_c11_mean_pred_corrected [0.00036, 19.1]
n
130,298,742
mean
0.177
sd
0.38

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1302987424.06% 130298665
chr1 12195346 4.90% 12195338
chr2 10696833 4.42% 10696825
chr3 8752287 4.41% 8752280
chr4 6609753 3.47% 6609751
chr5 7491023 4.13% 7491022
chr6 7866157 4.61% 7866152
chr7 6857344 4.30% 6857341
chr8 6077166 4.19% 6077162
chr9 5423632 3.92% 5423629
chr10 6619048 4.95% 6619046
chr11 6736236 4.99% 6736232
chr12 6327442 4.75% 6327434
chr13 3636875 3.18% 3636873
chr14 3802632 3.55% 3802630
chr15 4293763 4.21% 4293762
chr16 4101223 4.54% 4101220
chr17 5318679 6.39% 5318674
chr18 3037087 3.78% 3037083
chr19 4022655 6.86% 4022655
chr20 3347126 5.19% 3347124
chr21 1473616 3.15% 1473614
chr22 2444016 4.81% 2444015
chrX 3118063 2.00% 3118063
chrY 50740 0.09% 50740
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 130298665 1 2 1 1
global segment-length histogram

Files

Filename Size md5
Heart_c11__mean_pred_corrected.bw 988.71 MB a13d06361619e16c83ae253d91a8e019
genomic_resource.yaml 1.28 KB 07c75f0a41d906a2795bcdf5d7464245
statistics/