Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Heart/c12/mean_counts_contribscontent_copy
Type position_score
Version 0
Summary mean_counts_contribs for Heart for cell cluster c12
Description
Labels
  • assay: SHARE-seq
  • cluster: Heart_c12
  • data_types: atac_contribution
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Heart
  • processing_level: contribution_scores
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Heart_c12_mean_counts_contribs float

liu2026Multiomics_Heart_c12_mean_counts_contribs

base-resolution contribution scores for the counts head of ChromBPNet as computed by DeepLIFT
HISTOGRAM FOR liu2026Multiomics_Heart_c12_mean_counts_contribs [-0.0477, 0.122]
n
135,515,813
mean
0.000175
sd
0.0031

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1355158134.22% 134486024
chr1 13392524 5.38% 13292252
chr2 10915071 4.51% 10831339
chr3 8752823 4.41% 8685409
chr4 6143337 3.23% 6094688
chr5 7168118 3.95% 7112531
chr6 7970627 4.67% 7909000
chr7 6987682 4.39% 6933628
chr8 5801454 4.00% 5757093
chr9 5867305 4.24% 5823071
chr10 6514576 4.87% 6465056
chr11 7422709 5.49% 7367661
chr12 6583869 4.94% 6534261
chr13 3287407 2.87% 3261678
chr14 4227201 3.95% 4195375
chr15 4491977 4.40% 4457587
chr16 4537375 5.02% 4503497
chr17 6388198 7.67% 6340849
chr18 2765890 3.44% 2743731
chr19 5269985 8.99% 5232023
chr20 3533661 5.48% 3507481
chr21 1566923 3.35% 1555011
chr22 2857480 5.62% 2836540
chrX 2975186 1.91% 2952505
chrY 94435 0.17% 93758
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 134486024 1 942 1.01 1
global segment-length histogram

Files

Filename Size md5
Heart_c12__mean_counts_contribs.bw 832.52 MB 09ce07ea0bddde0c9caf7a1d2dc53c60
genomic_resource.yaml 1.31 KB fdf99ef2f33e4d4a037c475473fade1b
statistics/