Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Heart/c12/mean_pred_correctedcontent_copy
Type position_score
Version 0
Summary mean_pred_corrected for Heart for cell cluster c12
Description
Labels
  • assay: SHARE-seq
  • cluster: Heart_c12
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Heart
  • processing_level: phred_normalized
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Heart_c12_mean_pred_corrected float

liu2026Multiomics_Heart_c12_mean_pred_corrected

bias-corrected accessibility predicted by ChromBPNet
HISTOGRAM FOR liu2026Multiomics_Heart_c12_mean_pred_corrected [0.00242, 9]
n
70,423,525
mean
0.101
sd
0.166

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 704235252.19% 70423503
chr1 6979032 2.80% 6979031
chr2 5651524 2.33% 5651523
chr3 4521721 2.28% 4521719
chr4 3183106 1.67% 3183104
chr5 3698336 2.04% 3698333
chr6 4143820 2.43% 4143820
chr7 3614379 2.27% 3614379
chr8 2997127 2.07% 2997126
chr9 3045668 2.20% 3045668
chr10 3372122 2.52% 3372121
chr11 3861972 2.86% 3861970
chr12 3432320 2.58% 3432319
chr13 1695789 1.48% 1695789
chr14 2198804 2.05% 2198804
chr15 2326232 2.28% 2326229
chr16 2362231 2.61% 2362231
chr17 3370182 4.05% 3370179
chr18 1431691 1.78% 1431691
chr19 2810198 4.79% 2810198
chr20 1828122 2.84% 1828122
chr21 811981 1.74% 811981
chr22 1482641 2.92% 1482640
chrX 1552999 1.00% 1552998
chrY 51528 0.09% 51528
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 70423503 1 2 1 1
global segment-length histogram

Files

Filename Size md5
Heart_c12__mean_pred_corrected.bw 533.78 MB 2d787e507cdb28cfd244ef13a6abea7e
genomic_resource.yaml 1.28 KB 324d01ad8409ef89846a2aabe330b7c7
statistics/