Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Heart/c13/mean_counts_contribscontent_copy
Type position_score
Version 0
Summary mean_counts_contribs for Heart for cell cluster c13
Description
Labels
  • assay: SHARE-seq
  • cluster: Heart_c13
  • data_types: atac_contribution
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Heart
  • processing_level: contribution_scores
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Heart_c13_mean_counts_contribs float

liu2026Multiomics_Heart_c13_mean_counts_contribs

base-resolution contribution scores for the counts head of ChromBPNet as computed by DeepLIFT
HISTOGRAM FOR liu2026Multiomics_Heart_c13_mean_counts_contribs [-0.0447, 0.0809]
n
116,948,639
mean
6.07e-05
sd
0.00274

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1169486393.64% 115820737
chr1 11370301 4.57% 11261584
chr2 9140710 3.77% 9050871
chr3 7477518 3.77% 7403269
chr4 5468232 2.87% 5411938
chr5 6438722 3.55% 6374562
chr6 6924460 4.05% 6855457
chr7 5966699 3.74% 5908534
chr8 5246135 3.61% 5193965
chr9 4883414 3.53% 4837113
chr10 5839612 4.36% 5783419
chr11 6411385 4.75% 6351314
chr12 5770703 4.33% 5714545
chr13 2961189 2.59% 2931266
chr14 3458289 3.23% 3425380
chr15 3940632 3.86% 3903140
chr16 3867256 4.28% 3831904
chr17 5381066 6.46% 5332374
chr18 2489478 3.10% 2464780
chr19 4618991 7.88% 4579082
chr20 3062754 4.75% 3034175
chr21 1273881 2.73% 1261099
chr22 2342122 4.61% 2321039
chrX 2572188 1.65% 2547425
chrY 42902 0.07% 42502
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 115820737 1 937 1.01 1
global segment-length histogram

Files

Filename Size md5
Heart_c13__mean_counts_contribs.bw 718.35 MB 1b2b5ac42de7743edd753d7c2b893701
genomic_resource.yaml 1.31 KB 46d5e7d1fecbf954bab7d83a17342ebe
statistics/