Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Heart/c15/mean_counts_contribscontent_copy
Type position_score
Version 0
Summary mean_counts_contribs for Heart for cell cluster c15
Description
Labels
  • assay: SHARE-seq
  • cluster: Heart_c15
  • data_types: atac_contribution
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Heart
  • processing_level: contribution_scores
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Heart_c15_mean_counts_contribs float

liu2026Multiomics_Heart_c15_mean_counts_contribs

base-resolution contribution scores for the counts head of ChromBPNet as computed by DeepLIFT
HISTOGRAM FOR liu2026Multiomics_Heart_c15_mean_counts_contribs [-0.0477, 0.114]
n
132,575,826
mean
0.000126
sd
0.00313

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1325758264.13% 131505597
chr1 13037065 5.24% 12933545
chr2 10569872 4.36% 10482545
chr3 8819399 4.45% 8746874
chr4 6343513 3.33% 6288602
chr5 7384532 4.07% 7323344
chr6 7868701 4.61% 7803280
chr7 6775710 4.25% 6719172
chr8 5931488 4.09% 5882447
chr9 5577129 4.03% 5533078
chr10 6461387 4.83% 6409746
chr11 7276709 5.39% 7219256
chr12 6551480 4.92% 6497899
chr13 3389628 2.96% 3360283
chr14 3857245 3.60% 3826706
chr15 4480498 4.39% 4444369
chr16 4299224 4.76% 4266529
chr17 5908510 7.10% 5864700
chr18 2957887 3.68% 2933080
chr19 4929018 8.41% 4893372
chr20 3360099 5.21% 3333748
chr21 1377731 2.95% 1366044
chr22 2718529 5.35% 2698221
chrX 2654661 1.70% 2633306
chrY 45811 0.08% 45451
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 131505597 1 696 1.01 1
global segment-length histogram

Files

Filename Size md5
Heart_c15__mean_counts_contribs.bw 815.0 MB cd8120c19183371f8b47eba3efde0116
genomic_resource.yaml 1.31 KB dbc4e1547671bb7434a3ed9036076b75
statistics/