Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Heart/c15/mean_pred_correctedcontent_copy
Type position_score
Version 0
Summary mean_pred_corrected for Heart for cell cluster c15
Description
Labels
  • assay: SHARE-seq
  • cluster: Heart_c15
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Heart
  • processing_level: phred_normalized
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Heart_c15_mean_pred_corrected float

liu2026Multiomics_Heart_c15_mean_pred_corrected

bias-corrected accessibility predicted by ChromBPNet
HISTOGRAM FOR liu2026Multiomics_Heart_c15_mean_pred_corrected [0.000747, 6.26]
n
68,435,040
mean
0.0695
sd
0.122

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 684350402.13% 68435021
chr1 6746065 2.71% 6746064
chr2 5430210 2.24% 5430208
chr3 4536243 2.29% 4536242
chr4 3265875 1.72% 3265874
chr5 3805010 2.10% 3805010
chr6 4075773 2.39% 4075772
chr7 3477656 2.18% 3477655
chr8 3043729 2.10% 3043728
chr9 2880558 2.08% 2880557
chr10 3331216 2.49% 3331215
chr11 3750117 2.78% 3750117
chr12 3386401 2.54% 3386399
chr13 1730211 1.51% 1730211
chr14 2000976 1.87% 2000976
chr15 2305703 2.26% 2305703
chr16 2221703 2.46% 2221703
chr17 3093597 3.72% 3093595
chr18 1512166 1.88% 1512166
chr19 2608620 4.45% 2608619
chr20 1721487 2.67% 1721485
chr21 712783 1.53% 712783
chr22 1398169 2.75% 1398169
chrX 1376261 0.88% 1376259
chrY 24511 0.04% 24511
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 68435021 1 2 1 1
global segment-length histogram

Files

Filename Size md5
Heart_c15__mean_pred_corrected.bw 519.57 MB 07244dbf708f8a203bf47974aeae6748
genomic_resource.yaml 1.28 KB df5185443d72079db091188b91cff9b5
statistics/