Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Heart/c2/mean_counts_contribscontent_copy
Type position_score
Version 0
Summary mean_counts_contribs for Heart for cell cluster c2
Description
Labels
  • assay: SHARE-seq
  • cluster: Heart_c2
  • data_types: atac_contribution
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Heart
  • processing_level: contribution_scores
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Heart_c2_mean_counts_contribs float

liu2026Multiomics_Heart_c2_mean_counts_contribs

base-resolution contribution scores for the counts head of ChromBPNet as computed by DeepLIFT
HISTOGRAM FOR liu2026Multiomics_Heart_c2_mean_counts_contribs [-0.0865, 0.264]
n
286,252,256
mean
0.000354
sd
0.00436

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 2862522568.92% 284849844
chr1 26700041 10.72% 26570576
chr2 23761261 9.81% 23644392
chr3 19612279 9.89% 19515126
chr4 15676135 8.24% 15596850
chr5 17412412 9.59% 17326850
chr6 17189484 10.06% 17104614
chr7 15431275 9.68% 15354667
chr8 13686648 9.43% 13619827
chr9 11515146 8.32% 11458232
chr10 14448634 10.80% 14378998
chr11 14548707 10.77% 14478772
chr12 13882527 10.42% 13815001
chr13 8436702 7.38% 8394787
chr14 8334552 7.79% 8294201
chr15 9750867 9.56% 9703612
chr16 8288700 9.18% 8248993
chr17 10525560 12.64% 10474947
chr18 7247178 9.02% 7210932
chr19 7776781 13.27% 7739275
chr20 6943947 10.78% 6910398
chr21 3073586 6.58% 3057862
chr22 5045764 9.93% 5021563
chrX 6715445 4.30% 6681962
chrY 248625 0.43% 247407
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 284849844 1 752 1 1
global segment-length histogram

Files

Filename Size md5
Heart_c2__mean_counts_contribs.bw 1.72 GB 040483d91e5dcb822c075630a9ee8713
genomic_resource.yaml 1.31 KB d91470b5c5aab8390ef1ee202c4f3aa4
statistics/