Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Heart/c3/mean_counts_contribscontent_copy
Type position_score
Version 0
Summary mean_counts_contribs for Heart for cell cluster c3
Description
Labels
  • assay: SHARE-seq
  • cluster: Heart_c3
  • data_types: atac_contribution
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Heart
  • processing_level: contribution_scores
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Heart_c3_mean_counts_contribs float

liu2026Multiomics_Heart_c3_mean_counts_contribs

base-resolution contribution scores for the counts head of ChromBPNet as computed by DeepLIFT
HISTOGRAM FOR liu2026Multiomics_Heart_c3_mean_counts_contribs [-0.192, 0.234]
n
248,528,930
mean
0.000524
sd
0.0052

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 2485289307.74% 247324383
chr1 22217630 8.92% 22108882
chr2 20910523 8.63% 20809897
chr3 17045989 8.60% 16962710
chr4 12970905 6.82% 12906875
chr5 14492995 7.98% 14422622
chr6 15294709 8.95% 15220275
chr7 13109242 8.23% 13044662
chr8 11847143 8.16% 11789357
chr9 10796322 7.80% 10744345
chr10 12870567 9.62% 12809112
chr11 12889734 9.54% 12829034
chr12 11889425 8.92% 11832246
chr13 7432589 6.50% 7395799
chr14 7381433 6.90% 7346349
chr15 7887758 7.73% 7849803
chr16 7015241 7.77% 6981314
chr17 9422093 11.32% 9377138
chr18 6167974 7.67% 6136004
chr19 6882944 11.74% 6850537
chr20 6135855 9.52% 6106485
chr21 2970278 6.36% 2955427
chr22 4147429 8.16% 4128209
chrX 6679077 4.28% 6646584
chrY 71075 0.12% 70717
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 247324383 1 959 1 1
global segment-length histogram

Files

Filename Size md5
Heart_c3__mean_counts_contribs.bw 1.5 GB edaedd8f9d21819c2f5d62333d28d32e
genomic_resource.yaml 1.31 KB c8931f9e2bb2224a898ce8411ea700a1
statistics/