Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Heart/c3/mean_pred_correctedcontent_copy
Type position_score
Version 0
Summary mean_pred_corrected for Heart for cell cluster c3
Description
Labels
  • assay: SHARE-seq
  • cluster: Heart_c3
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Heart
  • processing_level: phred_normalized
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Heart_c3_mean_pred_corrected float

liu2026Multiomics_Heart_c3_mean_pred_corrected

bias-corrected accessibility predicted by ChromBPNet
HISTOGRAM FOR liu2026Multiomics_Heart_c3_mean_pred_corrected [0.000411, 44.5]
n
135,695,313
mean
0.321
sd
0.706

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1356953134.23% 135695204
chr1 12139331 4.88% 12139315
chr2 11424799 4.72% 11424789
chr3 9270367 4.68% 9270361
chr4 7062141 3.71% 7062132
chr5 7904929 4.35% 7904920
chr6 8337138 4.88% 8337135
chr7 7126960 4.47% 7126954
chr8 6434736 4.43% 6434734
chr9 5909859 4.27% 5909851
chr10 7035204 5.26% 7035203
chr11 7052027 5.22% 7052021
chr12 6513422 4.89% 6513419
chr13 4036758 3.53% 4036758
chr14 4054884 3.79% 4054877
chr15 4301750 4.22% 4301748
chr16 3830327 4.24% 3830325
chr17 5205894 6.25% 5205891
chr18 3353478 4.17% 3353474
chr19 3804944 6.49% 3804940
chr20 3334394 5.17% 3334391
chr21 1622487 3.47% 1622485
chr22 2263207 4.45% 2263205
chrX 3636732 2.33% 3636731
chrY 39545 0.07% 39545
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 135695204 1 2 1 1
global segment-length histogram

Files

Filename Size md5
Heart_c3__mean_pred_corrected.bw 1.0 GB 172a9fb731c9b83fde443dd9f0e29df7
genomic_resource.yaml 1.27 KB 2a527716afd7060265adbc2222b092a0
statistics/