Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Heart/c4/mean_counts_contribscontent_copy
Type position_score
Version 0
Summary mean_counts_contribs for Heart for cell cluster c4
Description
Labels
  • assay: SHARE-seq
  • cluster: Heart_c4
  • data_types: atac_contribution
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Heart
  • processing_level: contribution_scores
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Heart_c4_mean_counts_contribs float

liu2026Multiomics_Heart_c4_mean_counts_contribs

base-resolution contribution scores for the counts head of ChromBPNet as computed by DeepLIFT
HISTOGRAM FOR liu2026Multiomics_Heart_c4_mean_counts_contribs [-0.0827, 0.23]
n
333,276,980
mean
0.000447
sd
0.0045

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 33327698010.38% 331400166
chr1 30737701 12.35% 30564468
chr2 28099356 11.60% 27940865
chr3 22331465 11.26% 22205169
chr4 17208986 9.05% 17108831
chr5 19551027 10.77% 19440051
chr6 20231941 11.84% 20117766
chr7 17374626 10.90% 17275434
chr8 15531325 10.70% 15443282
chr9 13779157 9.96% 13700889
chr10 16978736 12.69% 16884870
chr11 17055507 12.63% 16960730
chr12 16237292 12.18% 16145821
chr13 9551373 8.35% 9496934
chr14 9748794 9.11% 9693985
chr15 11066820 10.85% 11004701
chr16 10431130 11.55% 10374072
chr17 13132149 15.77% 13059449
chr18 8182734 10.18% 8136057
chr19 9158717 15.62% 9109550
chr20 8635611 13.40% 8587715
chr21 3756059 8.04% 3734390
chr22 6133535 12.07% 6100698
chrX 8253675 5.29% 8205781
chrY 109264 0.19% 108658
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 331400166 1 926 1.01 1
global segment-length histogram

Files

Filename Size md5
Heart_c4__mean_counts_contribs.bw 2.0 GB f17f45bc742f8b31b5514360e8ccd839
genomic_resource.yaml 1.31 KB 6beaef8b89442b55ac2e53c0e687e1b8
statistics/